RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 HESX1Q9UBX0 185 aa23.42■■□□□ 1.34
SMARCD2-206ENST00000577990 CNTN6Q9UQ52 1028 aa23.42■■□□□ 1.34
SMARCD2-206ENST00000577990 MYO16Q9Y6X6 1858 aa23.42■■□□□ 1.34
SMARCD2-206ENST00000577990 MIA3Q5JRA6 1907 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 O00370 1275 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 STK25O00506 426 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 LETM1O95202 739 aaPredicted RBP23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 ZDHHC11BP0C7U3 371 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 KRT5P13647 590 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 AOC1P19801 751 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 BCAT1P54687 386 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 KRT31Q15323 416 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 MLF2Q15773 248 aaPredicted RBP23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 ANO6Q4KMQ2 910 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 ARHGAP29Q52LW3 1261 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 SLC44A4Q53GD3 710 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 SNX30Q5VWJ9 437 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 TFAP2BQ92481 460 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 UBXN6Q9BZV1 441 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 SIX2Q9NPC8 291 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 TRPV5Q9NQA5 729 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 CHORDC1Q9UHD1 332 aaPredicted RBP23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 SCML2Q9UQR0 700 aa23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 KIF26AQ9ULI4 1882 aaPredicted RBP23.41■■□□□ 1.34
SMARCD2-206ENST00000577990 WDR87Q6ZQQ6 2873 aa23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 HELZP42694 1942 aaKnown RBP23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 TICRRQ7Z2Z1 1910 aa23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 OAS1P00973 400 aaKnown RBP23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 TPM2P07951 284 aa23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 BRD2P25440 801 aaKnown RBP23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 KIF11P52732 1056 aa23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 BST2Q10589 180 aaKnown RBP23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 NCAPHQ15003 741 aa23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 STILQ15468 1287 aa23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 LCLAT1Q6UWP7 414 aa23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 PIGZQ86VD9 579 aa23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 SHDQ96IW2 340 aa23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 TBC1D17Q9HA65 648 aa23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 THG1LQ9NWX6 298 aaKnown RBP23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 ARHGAP26Q9UNA1 814 aa23.4■■□□□ 1.34
SMARCD2-206ENST00000577990 COL4A2P08572 1712 aa23.39■■□□□ 1.34
SMARCD2-206ENST00000577990 ARNTLO00327 626 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 XPO1O14980 1071 aaKnown RBP23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 OLFM2O95897 454 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 RFX1P22670 979 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 NUBP1P53384 320 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 SLC7A9P82251 487 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 PLCB2Q00722 1185 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 PRKCQQ04759 706 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 PDE4CQ08493 712 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 USP4Q13107 963 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 ZNF77Q15935 545 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 ARHGAP44Q17R89 818 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 HECTD3Q5T447 861 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 AOPEPQ8N6M6 819 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 ANKRD20A12PQ8NF67 263 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 BPIFA3Q9BQP9 254 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 VPS16Q9H269 839 aa23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 TLR8Q9NR97 1041 aaKnown RBP23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.39■■□□□ 1.33
SMARCD2-206ENST00000577990 CYP26A1O43174 497 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 CALCAP01258 141 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 SETSIPP0DME0 302 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 TCF3P15923 654 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 TUBP50607 506 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 STARD6P59095 220 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 CNGA2Q16280 664 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 RIN3Q8TB24 985 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 UBA3Q8TBC4 463 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 CSGALNACT1Q8TDX6 532 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 SH3RF2Q8TEC5 729 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 SHC3Q92529 594 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 ZFYVE19Q96K21 471 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 ZSWIM1Q9BR11 485 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 FUCA2Q9BTY2 467 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 RNF38Q9H0F5 515 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 HEBP1Q9NRV9 189 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 DNAJC12Q9UKB3 198 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 USP3Q9Y6I4 520 aa23.38■■□□□ 1.33
SMARCD2-206ENST00000577990 SYCE3A1L190 88 aa23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 TULP2O00295 520 aa23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 ZNF18P17022 549 aa23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 KCNMA1Q12791 1236 aa23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 MTF1Q14872 753 aa23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 PKDCCQ504Y2 493 aa23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 RAB41Q5JT25 222 aa23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 SMYD5Q6GMV2 418 aa23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 DPY19L2P1Q6NXN4 242 aa23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 CC2D1AQ6P1N0 951 aaPredicted RBP23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 TPRG1Q6ZUI0 275 aa23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 CCDC186Q7Z3E2 898 aa23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 CCSER2Q9H7U1 834 aa23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 LIMA1Q9UHB6 759 aaKnown RBP23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 AJAP1Q9UKB5 411 aaPredicted RBP23.37■■□□□ 1.33
SMARCD2-206ENST00000577990 RIF1Q5UIP0 2472 aaKnown RBP23.36■■□□□ 1.33
SMARCD2-206ENST00000577990 M0QYV0 167 aa23.36■■□□□ 1.33
SMARCD2-206ENST00000577990 COCHO43405 550 aa23.36■■□□□ 1.33
SMARCD2-206ENST00000577990 MBL2P11226 248 aaPredicted RBP23.36■■□□□ 1.33
SMARCD2-206ENST00000577990 PLA2G4AP47712 749 aa23.36■■□□□ 1.33
SMARCD2-206ENST00000577990 PGFP49763 221 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms