RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 CYP2A6P11509 494 aaPredicted RBP3.14□□□□□ -1.91
TOP2A-202ENST00000577541 HSPA6P17066 643 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 LRPAP1P30533 357 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 PHKA1P46020 1223 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 PXNP49023 591 aaPredicted RBP3.14□□□□□ -1.91
TOP2A-202ENST00000577541 SLC11A2P49281 568 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 GPSM2P81274 684 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 FGL2Q14314 439 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 ZNF267Q14586 743 aaPredicted RBP3.14□□□□□ -1.91
TOP2A-202ENST00000577541 SF3B4Q15427 424 aaKnown RBP eCLIP3.14□□□□□ -1.91
TOP2A-202ENST00000577541 AMOTQ4VCS5 1084 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 IFIT1BQ5T764 474 aaKnown RBP3.14□□□□□ -1.91
TOP2A-202ENST00000577541 CXorf57Q6NSI4 855 aaKnown RBP3.14□□□□□ -1.91
TOP2A-202ENST00000577541 MTHFD1LQ6UB35 978 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 MAVSQ7Z434 540 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 GALNT4Q8N4A0 578 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 ZNF548Q8NEK5 533 aaPredicted RBP3.14□□□□□ -1.91
TOP2A-202ENST00000577541 JPH3Q8WXH2 748 aaPredicted RBP3.14□□□□□ -1.91
TOP2A-202ENST00000577541 SOCS4Q8WXH5 440 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 TMEM204Q9BSN7 226 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 THAP7Q9BT49 309 aaPredicted RBP3.14□□□□□ -1.91
TOP2A-202ENST00000577541 FSD1LQ9BXM9 530 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 XPR1Q9UBH6 696 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 NDRG4Q9ULP0 352 aaKnown RBP3.14□□□□□ -1.91
TOP2A-202ENST00000577541 SHOC2Q9UQ13 582 aa3.14□□□□□ -1.91
TOP2A-202ENST00000577541 ZMYM2Q9UBW7 1377 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 TUSC2O75896 110 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 CSF1RP07333 972 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 GRPP07492 148 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 U2AF1L5P0DN76 240 aaPredicted RBP3.13□□□□□ -1.91
TOP2A-202ENST00000577541 XRCC6P12956 609 aaKnown RBP eCLIP3.13□□□□□ -1.91
TOP2A-202ENST00000577541 CHRM3P20309 590 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 HTR1BP28222 390 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 RAB27AP51159 221 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 IGBP1P78318 339 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 U2AF1Q01081 240 aaKnown RBP eCLIP3.13□□□□□ -1.91
TOP2A-202ENST00000577541 ZNF268Q14587 947 aaPredicted RBP3.13□□□□□ -1.91
TOP2A-202ENST00000577541 ANO6Q4KMQ2 910 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 KHDC1LQ5JSQ8 128 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 NXNQ6DKJ4 435 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 ZNF813Q6ZN06 617 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 GRAMD1CQ8IYS0 662 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 B4GALNT2Q8NHY0 566 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 ATG4AQ8WYN0 398 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 RUNDC1Q96C34 613 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 RSPRY1Q96DX4 576 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 SLITRK1Q96PX8 696 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 ACO2Q99798 780 aaKnown RBP3.13□□□□□ -1.91
TOP2A-202ENST00000577541 TMEM60Q9H2L4 133 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 DUSP22Q9NRW4 184 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 SELENONQ9NZV5 590 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 HEY2Q9UBP5 337 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 ZNF180Q9UJW8 692 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 PCDHA6Q9UN73 950 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 MMP24Q9Y5R2 645 aa3.13□□□□□ -1.91
TOP2A-202ENST00000577541 EVPLQ92817 2033 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 H7C1Q1 480 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 AP1G1O43747 822 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 TULP3O75386 442 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 USP1O94782 785 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 NGFRP08138 427 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 PDHA1P08559 390 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 CHRM5P08912 532 aaPredicted RBP3.12□□□□□ -1.91
TOP2A-202ENST00000577541 NPR1P16066 1061 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 NCLP19338 710 aaKnown RBP3.12□□□□□ -1.91
TOP2A-202ENST00000577541 EN2P19622 333 aaPredicted RBP3.12□□□□□ -1.91
TOP2A-202ENST00000577541 LIPAP38571 399 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 LILRA4P59901 499 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 E2F2Q14209 437 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 OVCH2Q7RTZ1 564 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 KIAA0319LQ8IZA0 1049 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.12□□□□□ -1.914e-6■□□□□ 10.7
TOP2A-202ENST00000577541 CELF5Q8N6W0 485 aaKnown RBP3.12□□□□□ -1.91
TOP2A-202ENST00000577541 ZNF479Q96JC4 524 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 MMS19Q96T76 1030 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 SMURF2Q9HAU4 748 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 ATP6V0A4Q9HBG4 840 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 XPNPEP3Q9NQH7 507 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 CNNM1Q9NRU3 951 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 THRAP3Q9Y2W1 955 aaKnown RBP3.12□□□□□ -1.91
TOP2A-202ENST00000577541 HS3ST3B1Q9Y662 390 aa3.12□□□□□ -1.91
TOP2A-202ENST00000577541 KIF26BQ2KJY2 2108 aa3.11□□□□□ -1.91
TOP2A-202ENST00000577541 LOC105371045A0A1W2PR82 267 aa3.11□□□□□ -1.91
TOP2A-202ENST00000577541 FAM227AF5H4B4 570 aa3.11□□□□□ -1.91
TOP2A-202ENST00000577541 PHGDHO43175 533 aaKnown RBP3.11□□□□□ -1.91
TOP2A-202ENST00000577541 CYP19A1P11511 503 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-202ENST00000577541 PDE6CP51160 858 aa3.11□□□□□ -1.91
TOP2A-202ENST00000577541 DGKEP52429 567 aa3.11□□□□□ -1.91
TOP2A-202ENST00000577541 UCP3P55916 312 aa3.11□□□□□ -1.91
TOP2A-202ENST00000577541 MYO1EQ12965 1108 aa3.11□□□□□ -1.91
TOP2A-202ENST00000577541 INPP5JQ15735 1006 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-202ENST00000577541 NFE2Q16621 373 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-202ENST00000577541 CCDC157Q569K6 752 aa3.11□□□□□ -1.91
TOP2A-202ENST00000577541 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
TOP2A-202ENST00000577541 FAM102BQ5T8I3 360 aa3.11□□□□□ -1.91
TOP2A-202ENST00000577541 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
TOP2A-202ENST00000577541 LMBRD2Q68DH5 695 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-202ENST00000577541 ZNF324BQ6AW86 544 aaPredicted RBP3.11□□□□□ -1.91
TOP2A-202ENST00000577541 FCRL6Q6DN72 434 aa3.11□□□□□ -1.91
TOP2A-202ENST00000577541 LAYNQ6UX15 382 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms