RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 STX1AQ16623 288 aa24.79■■□□□ 1.56
SNF8-217ENST00000576353 GOLGA7BQ2TAP0 167 aa24.79■■□□□ 1.56
SNF8-217ENST00000576353 ITPRIPL2Q3MIP1 535 aa24.79■■□□□ 1.56
SNF8-217ENST00000576353 TRIM65Q6PJ69 517 aa24.79■■□□□ 1.56
SNF8-217ENST00000576353 TTC16Q8NEE8 873 aa24.79■■□□□ 1.56
SNF8-217ENST00000576353 FAM3CQ92520 227 aa24.79■■□□□ 1.56
SNF8-217ENST00000576353 GTSE1Q9NYZ3 720 aa24.79■■□□□ 1.56
SNF8-217ENST00000576353 TSPAN16Q9UKR8 245 aa24.79■■□□□ 1.56
SNF8-217ENST00000576353 NFE2L3Q9Y4A8 694 aa24.79■■□□□ 1.56
SNF8-217ENST00000576353 KCNJ18B7U540 433 aa24.78■■□□□ 1.56
SNF8-217ENST00000576353 BCAT1P54687 386 aa24.78■■□□□ 1.56
SNF8-217ENST00000576353 TNK2Q07912 1038 aa24.78■■□□□ 1.56
SNF8-217ENST00000576353 KCNJ12Q14500 433 aa24.78■■□□□ 1.56
SNF8-217ENST00000576353 VWA3BQ502W6 1294 aa24.78■■□□□ 1.56
SNF8-217ENST00000576353 HSP90AA4PQ58FG1 418 aa24.78■■□□□ 1.56
SNF8-217ENST00000576353 RALGPS2Q86X27 583 aaPredicted RBP24.78■■□□□ 1.56
SNF8-217ENST00000576353 DDX42Q86XP3 938 aaKnown RBP eCLIP24.78■■□□□ 1.56
SNF8-217ENST00000576353 CCDC105Q8IYK2 499 aa24.78■■□□□ 1.56
SNF8-217ENST00000576353 KIAA1958Q8N8K9 716 aa24.78■■□□□ 1.56
SNF8-217ENST00000576353 RBBP8NLQ8NC74 664 aaPredicted RBP24.78■■□□□ 1.56
SNF8-217ENST00000576353 RIN3Q8TB24 985 aa24.78■■□□□ 1.56
SNF8-217ENST00000576353 KREMEN1Q96MU8 473 aa24.78■■□□□ 1.56
SNF8-217ENST00000576353 NDST4Q9H3R1 872 aa24.78■■□□□ 1.56
SNF8-217ENST00000576353 SAMSN1Q9NSI8 373 aaKnown RBP24.78■■□□□ 1.56
SNF8-217ENST00000576353 DUS2Q9NX74 493 aaKnown RBP24.78■■□□□ 1.56
SNF8-217ENST00000576353 CPQQ9Y646 472 aa24.78■■□□□ 1.56
SNF8-217ENST00000576353 RNF225M0QZC1 329 aaPredicted RBP24.77■■□□□ 1.56
SNF8-217ENST00000576353 LEFTY2O00292 366 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 O00370 1275 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 COCHO43405 550 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 DCNP07585 359 aaKnown RBP24.77■■□□□ 1.56
SNF8-217ENST00000576353 MBL2P11226 248 aaPredicted RBP24.77■■□□□ 1.56
SNF8-217ENST00000576353 SLC9A1P19634 815 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 PTPN5P54829 565 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 BST2Q10589 180 aaKnown RBP24.77■■□□□ 1.56
SNF8-217ENST00000576353 RUNX3Q13761 415 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 STILQ15468 1287 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 CNGA2Q16280 664 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 LCLAT1Q6UWP7 414 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 CCDC186Q7Z3E2 898 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 PIGZQ86VD9 579 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 TTC30AQ86WT1 665 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 DTWD2Q8NBA8 298 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 PRSS33Q8NF86 280 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 OSCP1Q8WVF1 389 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 NACA2Q9H009 215 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 IRF2BPLQ9H1B7 796 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 CNTN6Q9UQ52 1028 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 MTF2Q9Y483 593 aaPredicted RBP24.77■■□□□ 1.56
SNF8-217ENST00000576353 USP3Q9Y6I4 520 aa24.77■■□□□ 1.56
SNF8-217ENST00000576353 DENND4CQ5VZ89 1909 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 SHISA7A6NL88 538 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 XPO1O14980 1071 aaKnown RBP24.76■■□□□ 1.55
SNF8-217ENST00000576353 TARSP26639 723 aaKnown RBP24.76■■□□□ 1.55
SNF8-217ENST00000576353 PON1P27169 355 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 MAGEA9P43362 315 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 IFNAR2P48551 515 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 PSEN1P49768 467 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 ZNF132P52740 706 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 AMPD2Q01433 879 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 TCP11X2Q5H9J9 407 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 TTC8Q8TAM2 541 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 EBF3Q9H4W6 596 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 CCSER2Q9H7U1 834 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 SMPD4Q9NXE4 827 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 DLGAP2Q9P1A6 1054 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 TMEM63CQ9P1W3 806 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 APEX2Q9UBZ4 518 aa24.76■■□□□ 1.55
SNF8-217ENST00000576353 OBSL1O75147 1896 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 SPECC1L-ADORA2AF8WAN1 911 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 CYP26A1O43174 497 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 TLR5O60602 858 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 SETSIPP0DME0 302 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 KRT5P13647 590 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 CTHP32929 405 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 ZXDBP98169 803 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 PDE4CQ08493 712 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 RAB41Q5JT25 222 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 MIIPQ5JXC2 388 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 TRIM68Q6AZZ1 485 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 SMYD5Q6GMV2 418 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 TFAP2BQ92481 460 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 ATP2A3Q93084 1043 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 CYLDQ9NQC7 956 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 HPS4Q9NQG7 708 aa24.75■■□□□ 1.55
SNF8-217ENST00000576353 PES1O00541 588 aaKnown RBP24.74■■□□□ 1.55
SNF8-217ENST00000576353 SLC9A3R1O14745 358 aaPredicted RBP24.74■■□□□ 1.55
SNF8-217ENST00000576353 SOX9P48436 509 aa24.74■■□□□ 1.55
SNF8-217ENST00000576353 TADA2BQ86TJ2 420 aa24.74■■□□□ 1.55
SNF8-217ENST00000576353 ARHGAP18Q8N392 663 aa24.74■■□□□ 1.55
SNF8-217ENST00000576353 CPA6Q8N4T0 437 aa24.74■■□□□ 1.55
SNF8-217ENST00000576353 UBA3Q8TBC4 463 aa24.74■■□□□ 1.55
SNF8-217ENST00000576353 CLDN23Q96B33 292 aa24.74■■□□□ 1.55
SNF8-217ENST00000576353 LRRC4Q9HBW1 653 aa24.74■■□□□ 1.55
SNF8-217ENST00000576353 CFAP97Q9P2B7 532 aa24.74■■□□□ 1.55
SNF8-217ENST00000576353 NDRG2Q9UN36 371 aaKnown RBP24.74■■□□□ 1.55
SNF8-217ENST00000576353 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.74■■□□□ 1.55
SNF8-217ENST00000576353 WNT6Q9Y6F9 365 aa24.74■■□□□ 1.55
SNF8-217ENST00000576353 KMT2EQ8IZD2 1858 aa24.73■■□□□ 1.55
SNF8-217ENST00000576353 A0A1W2PQH9 124 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms