RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 NOCTQ9UK39 431 aaKnown RBP17.13■□□□□ 0.33
PFN1-203ENST00000574872 PCDHGC3Q9UN70 934 aa17.13■□□□□ 0.33
PFN1-203ENST00000574872 SCML2Q9UQR0 700 aa17.13■□□□□ 0.33
PFN1-203ENST00000574872 TTC28Q96AY4 2481 aa17.13■□□□□ 0.33
PFN1-203ENST00000574872 MYO16Q9Y6X6 1858 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 A0A1W2PQH9 124 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 FAM92AA1XBS5 289 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 GABBR2O75899 941 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 PDCLQ13371 301 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 ASIC2Q16515 512 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 FIGNQ5HY92 759 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 E4F1Q66K89 784 aaPredicted RBP17.12■□□□□ 0.33
PFN1-203ENST00000574872 PARM1Q6UWI2 310 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 VSTM4Q8IW00 320 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 PLCD3Q8N3E9 789 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 PDZD8Q8NEN9 1154 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 RSAD2Q8WXG1 361 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 KCTD13Q8WZ19 329 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 KXD1Q9BQD3 176 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 CEP83Q9Y592 693 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 USP3Q9Y6I4 520 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 ZFP37Q9Y6Q3 630 aaPredicted RBP17.12■□□□□ 0.33
PFN1-203ENST00000574872 ITIH6Q6UXX5 1313 aa17.12■□□□□ 0.33
PFN1-203ENST00000574872 ZBED1O96006 694 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 GYPCP04921 128 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 FERP16591 822 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 CHRNB2P17787 502 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 DDX6P26196 483 aaKnown RBP eCLIP17.11■□□□□ 0.331e-48■■□□□ 11.8
PFN1-203ENST00000574872 VIPR2P41587 438 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 CDR2Q01850 454 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 HTR4Q13639 388 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 MEA1Q16626 185 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 SFMBT2Q5VUG0 894 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 SPECC1LQ69YQ0 1117 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 CCDC186Q7Z3E2 898 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 MON1AQ86VX9 555 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 CMTM8Q8IZV2 173 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 WDTC1Q8N5D0 677 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 ARL14EPQ8N8R7 260 aaPredicted RBP17.11■□□□□ 0.33
PFN1-203ENST00000574872 TTC16Q8NEE8 873 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 OVCA2Q8WZ82 227 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 FGF14Q92915 247 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 SMARCD2Q92925 531 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 HSFY1Q96LI6 401 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 ASB16Q96NS5 453 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 SLC22A12Q96S37 553 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 CYP2S1Q96SQ9 504 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 MIS12Q9H081 205 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 LHX5Q9H2C1 402 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 NMUR1Q9HB89 426 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 SEPT11Q9NVA2 429 aaKnown RBP17.11■□□□□ 0.33
PFN1-203ENST00000574872 TJP2Q9UDY2 1190 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 NAGPAQ9UK23 515 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 MYO6Q9UM54 1294 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 NUMBLQ9Y6R0 609 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 OBSL1O75147 1896 aa17.11■□□□□ 0.33
PFN1-203ENST00000574872 TRAV19A0A0A6YYK7 116 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 A0A1W2PQJ5 194 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 E5RJQ4 531 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 PRAMEF12O95522 483 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 CKMP06732 381 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 ZDHHC11BP0C7U3 371 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 FCARP24071 287 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 CASP14P31944 242 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 AVPR1AP37288 418 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 PPP3CCP48454 512 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 FMO1Q01740 532 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 TANGO2Q6ICL3 276 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 SCD5Q86SK9 330 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 RNF135Q8IUD6 432 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 ARID3BQ8IVW6 561 aaPredicted RBP17.1■□□□□ 0.33
PFN1-203ENST00000574872 CLEC4CQ8WTT0 213 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 RPP25Q9BUL9 199 aaKnown RBP17.1■□□□□ 0.33
PFN1-203ENST00000574872 EDEM3Q9BZQ6 932 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 CCSER2Q9H7U1 834 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 KCNK12Q9HB15 430 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 TLR8Q9NR97 1041 aaKnown RBP17.1■□□□□ 0.33
PFN1-203ENST00000574872 OSER1Q9NX31 292 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 CAPN11Q9UMQ6 739 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.1■□□□□ 0.33
PFN1-203ENST00000574872 NCANO14594 1321 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 NCOR1O75376 2440 aa17.1■□□□□ 0.33
PFN1-203ENST00000574872 ANHXE9PGG2 379 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 CCDC172P0C7W6 258 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 HDCP19113 662 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 ZNF75DP51815 510 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 GOLGA8FQ08AF8 430 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 GOLGA8DPQ0D2H9 430 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 HECTD3Q5T447 861 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 NAA35Q5VZE5 725 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 MTSS1LQ765P7 747 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 TMC6Q7Z403 805 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 IRF2BP2Q7Z5L9 587 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 ZNF677Q86XU0 584 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 SCUBE3Q8IX30 993 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 TMEM35BQ8NCS4 154 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 ZNF397Q8NF99 534 aaPredicted RBP17.09■□□□□ 0.33
PFN1-203ENST00000574872 RSPRY1Q96DX4 576 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 PPP1R13BQ96KQ4 1090 aa17.09■□□□□ 0.33
PFN1-203ENST00000574872 NOX5Q96PH1 765 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms