RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 POLR3BQ9NW08 1133 aaPredicted RBP5.42□□□□□ -1.54
PRPF8-211ENST00000574728 BARHL2Q9NY43 387 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 ADAM29Q9UKF5 820 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 TBX21Q9UL17 535 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 TPCN1Q9ULQ1 816 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 ZMYND8Q9ULU4 1186 aaPredicted RBP5.42□□□□□ -1.54
PRPF8-211ENST00000574728 USP18Q9UMW8 372 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 EDARQ9UNE0 448 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 CUL9Q8IWT3 2517 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 ELP1O95163 1332 aa5.42□□□□□ -1.54
PRPF8-211ENST00000574728 KBTBD13C9JR72 458 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 HAS3O00219 553 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 PRPF3O43395 683 aaKnown RBP5.41□□□□□ -1.54
PRPF8-211ENST00000574728 DHX16O60231 1041 aaKnown RBP5.41□□□□□ -1.54
PRPF8-211ENST00000574728 PFKFB2O60825 505 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 DTNBO60941 627 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 ATP9AO75110 1047 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 H2AFYO75367 372 aaKnown RBP5.41□□□□□ -1.54
PRPF8-211ENST00000574728 LARGE1O95461 756 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 MT-CO1P00395 513 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 FDPSP14324 419 aaKnown RBP5.41□□□□□ -1.54
PRPF8-211ENST00000574728 SYN1P17600 705 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 UBA1P22314 1058 aaKnown RBP5.41□□□□□ -1.54
PRPF8-211ENST00000574728 PSMA5P28066 241 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 HOXC8P31273 242 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 MAGEA10P43363 369 aaPredicted RBP5.41□□□□□ -1.54
PRPF8-211ENST00000574728 MEOX1P50221 254 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 FXR1P51114 621 aaKnown RBP eCLIP5.41□□□□□ -1.542e-7■■■□□ 15.1
PRPF8-211ENST00000574728 STAT5BP51692 787 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 LGALS4P56470 323 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 NRG3P56975 720 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 SESN2P58004 480 aaPredicted RBP5.41□□□□□ -1.54
PRPF8-211ENST00000574728 PSMC6P62333 389 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 USP10Q14694 798 aaKnown RBP5.41□□□□□ -1.54
PRPF8-211ENST00000574728 STXBP2Q15833 593 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 TOR2AQ5JU69 321 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 C1QL4Q86Z23 238 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 BCL6BQ8N143 479 aaPredicted RBP5.41□□□□□ -1.54
PRPF8-211ENST00000574728 C1orf162Q8NEQ5 155 aaPredicted RBP5.41□□□□□ -1.54
PRPF8-211ENST00000574728 OR14C36Q8NHC7 312 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 CYP2W1Q8TAV3 490 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 GAB3Q8WWW8 586 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 AUTS2Q8WXX7 1259 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 PHKBQ93100 1093 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 ZNF274Q96GC6 653 aaPredicted RBP5.41□□□□□ -1.54
PRPF8-211ENST00000574728 HAPLN2Q9GZV7 340 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 QRSL1Q9H0R6 528 aaKnown RBP5.41□□□□□ -1.54
PRPF8-211ENST00000574728 PSTPIP2Q9H939 334 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 RIC8AQ9NPQ8 531 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 RBM28Q9NW13 759 aaKnown RBP5.41□□□□□ -1.54
PRPF8-211ENST00000574728 DNAJC28Q9NX36 388 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 MKS1Q9NXB0 559 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 PRSS50Q9UI38 385 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 MAGEL2Q9UJ55 1249 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 TMPRSS11EQ9UL52 423 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 VWA7Q9Y334 891 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 ZDHHC9Q9Y397 364 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 NR2E3Q9Y5X4 410 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 UBIAD1Q9Y5Z9 338 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 CYP46A1Q9Y6A2 500 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 SCN10AQ9Y5Y9 1956 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 XIRP2A4UGR9 3374 aa5.41□□□□□ -1.54
PRPF8-211ENST00000574728 IGLV3-22A0A075B6J6 115 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 ESYT2A0FGR8 921 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 S100BP04271 92 aaPredicted RBP5.4□□□□□ -1.54
PRPF8-211ENST00000574728 MMP3P08254 477 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 ZSCAN22P10073 491 aaPredicted RBP5.4□□□□□ -1.54
PRPF8-211ENST00000574728 TXNP10599 105 aaKnown RBP5.4□□□□□ -1.54
PRPF8-211ENST00000574728 RBP3P10745 1247 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 SCG2P13521 617 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 KCNA2P16389 499 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 CSF2RBP32927 897 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 METAP2P50579 478 aaKnown RBP eCLIP5.4□□□□□ -1.54
PRPF8-211ENST00000574728 AK2P54819 239 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 SRSF2Q01130 221 aaKnown RBP5.4□□□□□ -1.54
PRPF8-211ENST00000574728 TRIM25Q14258 630 aaKnown RBP5.4□□□□□ -1.54
PRPF8-211ENST00000574728 GPNMBQ14956 572 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 PCOLCEQ15113 449 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 PPP2R5BQ15173 497 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 CLUL1Q15846 466 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 MAN2A1Q16706 1144 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 ME3Q16798 604 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 PTPN21Q16825 1174 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 HSDL1Q3SXM5 330 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 ZMAT1Q5H9K5 638 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 CELF3Q5SZQ8 465 aaKnown RBP5.4□□□□□ -1.54
PRPF8-211ENST00000574728 ARHGEF16Q5VV41 709 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 TRIM68Q6AZZ1 485 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 BORAQ6PGQ7 559 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 KLHDC10Q6PID8 442 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 SEPT14Q6ZU15 432 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 HEATR3Q7Z4Q2 680 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 ZBTB46Q86UZ6 589 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 PCSK9Q8NBP7 692 aaKnown RBP5.4□□□□□ -1.54
PRPF8-211ENST00000574728 AFG1LQ8WV93 481 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 GFM2Q969S9 779 aaKnown RBP5.4□□□□□ -1.54
PRPF8-211ENST00000574728 LENG9Q96B70 501 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 FUBP3Q96I24 572 aaKnown RBP eCLIP5.4□□□□□ -1.54
PRPF8-211ENST00000574728 FAXDC2Q96IV6 333 aa5.4□□□□□ -1.54
PRPF8-211ENST00000574728 WDR92Q96MX6 357 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms