RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, human

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPLOC4-215	ENST00000574095	DCAF17	Q5H9S7	520 aa	Predicted RBP	27.58	■■■□□ 2.01
NPLOC4-215	ENST00000574095	PKN3	Q6P5Z2	889 aa		27.58	■■■□□ 2.01
NPLOC4-215	ENST00000574095	ZC3H3	Q8IXZ2	948 aa	Known RBP	27.58	■■■□□ 2.01
NPLOC4-215	ENST00000574095	DCLK2	Q8N568	766 aa		27.58	■■■□□ 2.01
NPLOC4-215	ENST00000574095	HNRNPAB	Q99729	332 aa	Known RBP	27.58	■■■□□ 2.01
NPLOC4-215	ENST00000574095	P2RY13	Q9BPV8	354 aa		27.58	■■■□□ 2.01
NPLOC4-215	ENST00000574095	HINFP	Q9BQA5	517 aa		27.58	■■■□□ 2.01
NPLOC4-215	ENST00000574095	COMMD8	Q9NX08	183 aa		27.58	■■■□□ 2.01
NPLOC4-215	ENST00000574095	GMIP	Q9P107	970 aa		27.58	■■■□□ 2.01
NPLOC4-215	ENST00000574095	SCAMP3	O14828	347 aa	Known RBP	27.57	■■■□□ 2
NPLOC4-215	ENST00000574095	FAM200B	P0CF97	657 aa		27.57	■■■□□ 2
NPLOC4-215	ENST00000574095	DMWD	Q09019	674 aa		27.57	■■■□□ 2
NPLOC4-215	ENST00000574095	NR1H3	Q13133	447 aa		27.57	■■■□□ 2
NPLOC4-215	ENST00000574095	ZNF394	Q53GI3	561 aa		27.57	■■■□□ 2
NPLOC4-215	ENST00000574095	FILIP1	Q7Z7B0	1213 aa		27.57	■■■□□ 2
NPLOC4-215	ENST00000574095	ELOA2	Q8IYF1	753 aa	Predicted RBP	27.57	■■■□□ 2
NPLOC4-215	ENST00000574095	TATDN2	Q93075	761 aa		27.57	■■■□□ 2
NPLOC4-215	ENST00000574095	GTPBP4	Q9BZE4	634 aa	Known RBP	27.57	■■■□□ 2
NPLOC4-215	ENST00000574095	FRYL	O94915	3013 aa		27.57	■■■□□ 2
NPLOC4-215	ENST00000574095	FAM92A	A1XBS5	289 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095		K7ESF4	209 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	SLC16A3	O15427	465 aa	Known RBP	27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	COCH	O43405	550 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	CD44	P16070	742 aa	Known RBP	27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	LRRC63	Q05C16	580 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	CBWD6	Q4V339	395 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	CBWD3	Q5JTY5	395 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	CBWD5	Q5RIA9	395 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	HECTD3	Q5T447	861 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	SNX30	Q5VWJ9	437 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	CLEC20A	Q6ZU45	233 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	RUBCN	Q92622	972 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	CD101	Q93033	1021 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	JAKMIP2	Q96AA8	810 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	CCSER2	Q9H7U1	834 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	CFAP97	Q9P2B7	532 aa		27.56	■■■□□ 2
NPLOC4-215	ENST00000574095	CHURC1-FNTB	B4DL54	471 aa		27.55	■■■□□ 2
NPLOC4-215	ENST00000574095	PAPSS2	O95340	614 aa	Predicted RBP	27.55	■■■□□ 2
NPLOC4-215	ENST00000574095	NFATC1	O95644	943 aa		27.55	■■■□□ 2
NPLOC4-215	ENST00000574095	ZDHHC11B	P0C7U3	371 aa		27.55	■■■□□ 2
NPLOC4-215	ENST00000574095	DRD1	P21728	446 aa		27.55	■■■□□ 2
NPLOC4-215	ENST00000574095	FNTB	P49356	437 aa		27.55	■■■□□ 2
NPLOC4-215	ENST00000574095	PGF	P49763	221 aa		27.55	■■■□□ 2
NPLOC4-215	ENST00000574095	STIM1	Q13586	685 aa		27.55	■■■□□ 2
NPLOC4-215	ENST00000574095	HEATR6	Q6AI08	1181 aa	Known RBP	27.55	■■■□□ 2
NPLOC4-215	ENST00000574095	GPRIN1	Q7Z2K8	1008 aa		27.55	■■■□□ 2
NPLOC4-215	ENST00000574095	EPC1	Q9H2F5	836 aa		27.55	■■■□□ 2
NPLOC4-215	ENST00000574095	FBXO44	Q9H4M3	255 aa		27.55	■■■□□ 2
NPLOC4-215	ENST00000574095	MYO16	Q9Y6X6	1858 aa		27.55	■■■□□ 2
NPLOC4-215	ENST00000574095	PSMA7	O14818	248 aa		27.54	■■■□□ 2
NPLOC4-215	ENST00000574095	RNF40	O75150	1001 aa		27.54	■■■□□ 2
NPLOC4-215	ENST00000574095	ADGRG2	Q8IZP9	1017 aa		27.54	■■■□□ 2
NPLOC4-215	ENST00000574095	EXOC4	Q96A65	974 aa		27.54	■■■□□ 2
NPLOC4-215	ENST00000574095	DHTKD1	Q96HY7	919 aa	Predicted RBP	27.54	■■■□□ 2
NPLOC4-215	ENST00000574095	ARID3A	Q99856	593 aa		27.54	■■■□□ 2
NPLOC4-215	ENST00000574095	ARMCX3	Q9UH62	379 aa	Predicted RBP	27.54	■■■□□ 2
NPLOC4-215	ENST00000574095	EP300	Q09472	2414 aa	Predicted RBP	27.53	■■■□□ 2
NPLOC4-215	ENST00000574095	HHLA1	C9JL84	531 aa		27.53	■■■□□ 2
NPLOC4-215	ENST00000574095	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	27.53	■■■□□ 2
NPLOC4-215	ENST00000574095	EZH1	Q92800	747 aa	Predicted RBP	27.53	■■■□□ 2
NPLOC4-215	ENST00000574095	ZFR	Q96KR1	1074 aa	Known RBP	27.53	■■■□□ 2
NPLOC4-215	ENST00000574095	HEXIM2	Q96MH2	286 aa	Known RBP	27.53	■■■□□ 2
NPLOC4-215	ENST00000574095	DNAI2	Q9GZS0	605 aa		27.53	■■■□□ 2
NPLOC4-215	ENST00000574095	CISH	Q9NSE2	258 aa		27.53	■■■□□ 2
NPLOC4-215	ENST00000574095	CIZ1	Q9ULV3	898 aa	Predicted RBP	27.53	■■■□□ 2
NPLOC4-215	ENST00000574095	SMG5	Q9UPR3	1016 aa	Known RBP	27.53	■■■□□ 2
NPLOC4-215	ENST00000574095	MYOF	Q9NZM1	2061 aa		27.53	■■■□□ 2
NPLOC4-215	ENST00000574095	BMP6	P22004	513 aa		27.52	■■■□□ 2
NPLOC4-215	ENST00000574095	KLHL10	Q6JEL2	608 aa		27.52	■■■□□ 2
NPLOC4-215	ENST00000574095	DDX42	Q86XP3	938 aa	Known RBP eCLIP	27.52	■■■□□ 2
NPLOC4-215	ENST00000574095	KIAA2013	Q8IYS2	634 aa		27.52	■■■□□ 2
NPLOC4-215	ENST00000574095	FAXDC2	Q96IV6	333 aa		27.52	■■■□□ 2
NPLOC4-215	ENST00000574095	TLR8	Q9NR97	1041 aa	Known RBP	27.52	■■■□□ 2
NPLOC4-215	ENST00000574095	POLR3B	Q9NW08	1133 aa	Predicted RBP	27.52	■■■□□ 2
NPLOC4-215	ENST00000574095	NCDN	Q9UBB6	729 aa		27.52	■■■□□ 2
NPLOC4-215	ENST00000574095	COQ4	Q9Y3A0	265 aa		27.52	■■■□□ 2
NPLOC4-215	ENST00000574095	OTOGL	Q3ZCN5	2332 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	ZNF292	O60281	2723 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	BIN1	O00499	593 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	SLC9A3R1	O14745	358 aa	Predicted RBP	27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	ATG13	O75143	517 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	CYP17A1	P05093	508 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	ACO1	P21399	889 aa	Known RBP	27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	TUB	P50607	506 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	DHCR24	Q15392	516 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	GAB4	Q2WGN9	574 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	LONP2	Q86WA8	852 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	KIAA1958	Q8N8K9	716 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	SLC4A11	Q8NBS3	891 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	SLC35C1	Q96A29	364 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	TMEM176A	Q96HP8	235 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	DUSP9	Q99956	384 aa	Known RBP	27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	NACA2	Q9H009	215 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	GVINP1	Q7Z2Y8	2422 aa		27.51	■■□□□ 1.99
NPLOC4-215	ENST00000574095	PPP1R3G	B7ZBB8	358 aa		27.5	■■□□□ 1.99
NPLOC4-215	ENST00000574095	HR	O43593	1189 aa		27.5	■■□□□ 1.99
NPLOC4-215	ENST00000574095	OPRD1	P41143	372 aa		27.5	■■□□□ 1.99
NPLOC4-215	ENST00000574095	RAD23B	P54727	409 aa		27.5	■■□□□ 1.99
NPLOC4-215	ENST00000574095	SRSF5	Q13243	272 aa	Known RBP	27.5	■■□□□ 1.99
NPLOC4-215	ENST00000574095	LPAL2	Q16609	132 aa		27.5	■■□□□ 1.99

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