RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 CLDN5O00501 218 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 SCAMP3O14828 347 aaKnown RBP12.94□□□□□ -0.34
CCDC40-210ENST00000573903 KAT7O95251 611 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 P4HA1P13674 534 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 ZXDBP98169 803 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 CRY1Q16526 586 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 KNOP1Q1ED39 458 aaKnown RBP12.94□□□□□ -0.34
CCDC40-210ENST00000573903 BMT2Q1RMZ1 405 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 EOGTQ5NDL2 527 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 N4BP2L1Q5TBK1 243 aaPredicted RBP12.94□□□□□ -0.34
CCDC40-210ENST00000573903 TCEAL6Q6IPX3 200 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 NUDT18Q6ZVK8 323 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 RASSF3Q86WH2 238 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 ADGRG2Q8IZP9 1017 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 WHAMMQ8TF30 809 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 TCEAL3Q969E4 200 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 OTUB2Q96DC9 234 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 SMARCD1Q96GM5 515 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 SPATA32Q96LK8 384 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 LSM14BQ9BX40 385 aaKnown RBP12.94□□□□□ -0.34
CCDC40-210ENST00000573903 B3GNT5Q9BYG0 378 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 SLC39A2Q9NP94 309 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 DMAP1Q9NPF5 467 aaPredicted RBP12.94□□□□□ -0.34
CCDC40-210ENST00000573903 ARHGEF4Q9NR80 690 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 INVSQ9Y283 1065 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 ZDHHC9Q9Y397 364 aa12.94□□□□□ -0.34
CCDC40-210ENST00000573903 MYH10P35580 1976 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 E2F8A0AVK6 867 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 TM4SF5O14894 197 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 KHNYNO15037 678 aaKnown RBP12.93□□□□□ -0.34
CCDC40-210ENST00000573903 MAP3K13O43283 966 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 KRT37O76014 449 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 KCNK5O95279 499 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 KLF8O95600 359 aaPredicted RBP12.93□□□□□ -0.34
CCDC40-210ENST00000573903 PMLP29590 882 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 TIE1P35590 1138 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 GRIA2P42262 883 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 AFMP43652 599 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 DHPSP49366 369 aaPredicted RBP12.93□□□□□ -0.34
CCDC40-210ENST00000573903 SLC5A3P53794 718 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 CACNA2D1P54289 1103 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 GAD2Q05329 585 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 KDSRQ06136 332 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 EHHADHQ08426 723 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 NCOA4Q13772 614 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 BYSLQ13895 437 aaKnown RBP12.93□□□□□ -0.34
CCDC40-210ENST00000573903 HECTD3Q5T447 861 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 SCARA5Q6ZMJ2 495 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 TRMT11Q7Z4G4 463 aaKnown RBP12.93□□□□□ -0.34
CCDC40-210ENST00000573903 FAM35AQ86V20 835 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 ALLCQ8N6M5 410 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 TXNDC5Q8NBS9 432 aaKnown RBP12.93□□□□□ -0.34
CCDC40-210ENST00000573903 MDGA1Q8NFP4 955 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 ZNF516Q92618 1163 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 SCAND2PQ9GZW5 306 aaPredicted RBP12.93□□□□□ -0.34
CCDC40-210ENST00000573903 XYLT2Q9H1B5 865 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 SMYD3Q9H7B4 428 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 VRTNQ9H8Y1 702 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 EXOC1Q9NV70 894 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 COMMD8Q9NX08 183 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 RCOR1Q9UKL0 485 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 NME7Q9Y5B8 376 aa12.93□□□□□ -0.34
CCDC40-210ENST00000573903 COCHO43405 550 aa12.92□□□□□ -0.34
CCDC40-210ENST00000573903 CASP1P29466 404 aa12.92□□□□□ -0.34
CCDC40-210ENST00000573903 TNFRSF4P43489 277 aa12.92□□□□□ -0.34
CCDC40-210ENST00000573903 TUBP50607 506 aa12.92□□□□□ -0.34
CCDC40-210ENST00000573903 NOVA1P51513 510 aaKnown RBP12.92□□□□□ -0.34
CCDC40-210ENST00000573903 GAB4Q2WGN9 574 aa12.92□□□□□ -0.34
CCDC40-210ENST00000573903 PSAPL1Q6NUJ1 521 aa12.92□□□□□ -0.34
CCDC40-210ENST00000573903 RHBDF2Q6PJF5 856 aa12.92□□□□□ -0.34
CCDC40-210ENST00000573903 LPCAT2Q7L5N7 544 aa12.92□□□□□ -0.34
CCDC40-210ENST00000573903 PGBD3Q8N328 593 aa12.92□□□□□ -0.34
CCDC40-210ENST00000573903 TMEM9BQ9NQ34 198 aa12.92□□□□□ -0.34
CCDC40-210ENST00000573903 KRT82Q9NSB4 513 aa12.92□□□□□ -0.34
CCDC40-210ENST00000573903 TMEM30AQ9NV96 361 aa12.92□□□□□ -0.34
CCDC40-210ENST00000573903 PCDHA7Q9UN72 937 aa12.92□□□□□ -0.34
CCDC40-210ENST00000573903 LNP1A1A4G5 178 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 TBC1D3BA6NDS4 549 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 LRRIQ3A6PVS8 624 aaPredicted RBP12.91□□□□□ -0.34
CCDC40-210ENST00000573903 C4orf47A7E2U8 309 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 ZBTB24O43167 697 aaPredicted RBP12.91□□□□□ -0.34
CCDC40-210ENST00000573903 AP1G2O75843 785 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 BCKDHBP21953 392 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 DPP6P42658 865 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 SLC6A11P48066 632 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 CASP4P49662 377 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 CDH8P55286 799 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 SHC2P98077 582 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 GOLGA8FQ08AF8 430 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 GOLGA8DPQ0D2H9 430 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 CUL4BQ13620 913 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 ANO4Q32M45 955 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 LY6G5CQ5SRR4 150 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 RESP18Q5W5W9 173 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 C12orf40Q86WS4 652 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 IL17RCQ8NAC3 791 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 PARD3BQ8TEW8 1205 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 HMGB4Q8WW32 186 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 PIGKQ92643 395 aa12.91□□□□□ -0.34
CCDC40-210ENST00000573903 KCNK16Q96T55 309 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms