RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ATP5OP48047 213 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 TUBP50607 506 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 STAT5BP51692 787 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 CDH6P55285 790 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 NBPF12Q5TAG4 269 aaPredicted RBP16.29■□□□□ 0.2
NUP88-207ENST00000573584 AS3MTQ9HBK9 375 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 RAB6BQ9NRW1 208 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 FER1L6Q2WGJ9 1857 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.29■□□□□ 0.2
NUP88-207ENST00000573584 HSPA1LP34931 641 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 PGM1P36871 562 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 MXRA7P84157 204 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 CNTN2Q02246 1040 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 NOMO1Q15155 1222 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 PDCD7Q8N8D1 485 aaKnown RBP16.29■□□□□ 0.2
NUP88-207ENST00000573584 RNF149Q8NC42 400 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 ZNF483Q8TF39 744 aaPredicted RBP16.29■□□□□ 0.2
NUP88-207ENST00000573584 FAM136AQ96C01 138 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 ANKRD36BP1Q96IX9 119 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.29■□□□□ 0.2
NUP88-207ENST00000573584 I3L4J1 428 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 CHADO15335 359 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 KRT37O76014 449 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 SKIP12755 728 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 CPA2P48052 419 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 OCRLQ01968 901 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 LBRQ14739 615 aaKnown RBP16.29■□□□□ 0.2
NUP88-207ENST00000573584 C1orf228Q6PIY5 440 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 LRRC74BQ6ZQY2 392 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 MECRQ9BV79 373 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 ASNSD1Q9NWL6 643 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 LRCH1Q9Y2L9 728 aa16.29■□□□□ 0.2
NUP88-207ENST00000573584 B2RBV5 119 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 SNRPAP09012 282 aaKnown RBP16.28■□□□□ 0.2
NUP88-207ENST00000573584 PTPRAP18433 802 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 UBA1P22314 1058 aaKnown RBP16.28■□□□□ 0.2
NUP88-207ENST00000573584 LAMTOR4Q0VGL1 99 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 ACAP1Q15027 740 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 ZNF667Q5HYK9 610 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 SH3PXD2AQ5TCZ1 1133 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 ZBTB8OSQ8IWT0 167 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 ARHGAP24Q8N264 748 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 PEBP4Q96S96 227 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 PNPLA8Q9NP80 782 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 PICK1Q9NRD5 415 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 STX18Q9P2W9 335 aaKnown RBP16.28■□□□□ 0.2
NUP88-207ENST00000573584 PLLPQ9Y342 182 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 SPDYE5A6NIY4 337 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 GCLCP48506 637 aaPredicted RBP16.28■□□□□ 0.2
NUP88-207ENST00000573584 TMPRSS15P98073 1019 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 THOC5Q13769 683 aaKnown RBP16.28■□□□□ 0.2
NUP88-207ENST00000573584 FAM102AQ5T9C2 384 aaPredicted RBP16.28■□□□□ 0.2
NUP88-207ENST00000573584 IRGCQ6NXR0 463 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.28■□□□□ 0.2
NUP88-207ENST00000573584 UCMAQ8WVF2 138 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 ADPGKQ9BRR6 497 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 SLC13A1Q9BZW2 595 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 SPATS2LQ9NUQ6 558 aaKnown RBP16.28■□□□□ 0.2
NUP88-207ENST00000573584 KCNK4Q9NYG8 393 aa16.28■□□□□ 0.2
NUP88-207ENST00000573584 ZC3H7BQ9UGR2 993 aaKnown RBP16.28■□□□□ 0.2
NUP88-207ENST00000573584 CXorf49A8MYA2 514 aaPredicted RBP16.27■□□□□ 0.2
NUP88-207ENST00000573584 YWHAZP63104 245 aaKnown RBP16.27■□□□□ 0.2
NUP88-207ENST00000573584 BST1Q10588 318 aa16.27■□□□□ 0.2
NUP88-207ENST00000573584 TFDP2Q14188 446 aa16.27■□□□□ 0.2
NUP88-207ENST00000573584 RCN2Q14257 317 aa16.27■□□□□ 0.2
NUP88-207ENST00000573584 ZRSR2Q15696 482 aaKnown RBP16.27■□□□□ 0.2
NUP88-207ENST00000573584 LGSNQ5TDP6 509 aa16.27■□□□□ 0.2
NUP88-207ENST00000573584 RFX8Q6ZV50 586 aa16.27■□□□□ 0.2
NUP88-207ENST00000573584 CDR2LQ86X02 465 aaPredicted RBP16.27■□□□□ 0.2
NUP88-207ENST00000573584 CEP120Q8N960 986 aa16.27■□□□□ 0.2
NUP88-207ENST00000573584 PPFIBP2Q8ND30 876 aa16.27■□□□□ 0.2
NUP88-207ENST00000573584 SMC1BQ8NDV3 1235 aa16.27■□□□□ 0.2
NUP88-207ENST00000573584 MCRS1Q96EZ8 462 aa16.27■□□□□ 0.2
NUP88-207ENST00000573584 TWNKQ96RR1 684 aa16.27■□□□□ 0.2
NUP88-207ENST00000573584 DLGAP2Q9P1A6 1054 aa16.27■□□□□ 0.2
NUP88-207ENST00000573584 PAK5Q9P286 719 aa16.27■□□□□ 0.2
NUP88-207ENST00000573584 TTLL3Q9Y4R7 772 aa16.27■□□□□ 0.2
NUP88-207ENST00000573584 SIP14410 1827 aa16.27■□□□□ 0.2
NUP88-207ENST00000573584 H3BRJ5 948 aa16.27■□□□□ 0.19
NUP88-207ENST00000573584 KCNN4O15554 427 aa16.27■□□□□ 0.19
NUP88-207ENST00000573584 FARP2O94887 1054 aaPredicted RBP16.27■□□□□ 0.19
NUP88-207ENST00000573584 C1QAP02745 245 aa16.27■□□□□ 0.19
NUP88-207ENST00000573584 ENO1P06733 434 aaKnown RBP16.27■□□□□ 0.19
NUP88-207ENST00000573584 FAM47CQ5HY64 1035 aa16.27■□□□□ 0.19
NUP88-207ENST00000573584 IER5Q5VY09 327 aa16.27■□□□□ 0.19
NUP88-207ENST00000573584 FAM91A1Q658Y4 838 aa16.27■□□□□ 0.19
NUP88-207ENST00000573584 ARID3BQ8IVW6 561 aaPredicted RBP16.27■□□□□ 0.19
NUP88-207ENST00000573584 TRIM42Q8IWZ5 723 aa16.27■□□□□ 0.19
NUP88-207ENST00000573584 SLC4A11Q8NBS3 891 aa16.27■□□□□ 0.19
NUP88-207ENST00000573584 CCDC110Q8TBZ0 833 aa16.27■□□□□ 0.19
NUP88-207ENST00000573584 E2F7Q96AV8 911 aa16.27■□□□□ 0.19
NUP88-207ENST00000573584 USP29Q9HBJ7 922 aa16.27■□□□□ 0.19
NUP88-207ENST00000573584 ARHGEF4Q9NR80 690 aa16.27■□□□□ 0.19
NUP88-207ENST00000573584 PPARGC1AQ9UBK2 798 aaKnown RBP16.27■□□□□ 0.19
NUP88-207ENST00000573584 FZD1Q9UP38 647 aa16.27■□□□□ 0.19
NUP88-207ENST00000573584 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.27■□□□□ 0.19
NUP88-207ENST00000573584 A8MXQ7 604 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 M0QYV0 167 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 B4GALT4O60513 344 aa16.26■□□□□ 0.19
NUP88-207ENST00000573584 MICAL2O94851 1124 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms