RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 RUNX1T1Q06455 604 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 GABPB1Q06547 395 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 SPIRE1Q08AE8 756 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 LMAN2Q12907 356 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 LSAMPQ13449 338 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 TUSC3Q13454 348 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 RIPK1Q13546 671 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 LBRQ14739 615 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 CRYMQ14894 314 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 TMEM132BQ14DG7 1078 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 AOC3Q16853 763 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 C15orf59Q2T9L4 293 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 ZNF628Q5EBL2 1059 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 ZBTB41Q5SVQ8 909 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 PRAMEF13Q5VWM6 474 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 CWF19L1Q69YN2 538 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 FSTL4Q6MZW2 842 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 ARHGAP11AQ6P4F7 1023 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 TMEM154Q6P9G4 183 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 FAM111BQ6SJ93 734 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 MSANTD1Q6ZTZ1 278 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 RRAGAQ7L523 313 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 OTOAQ7RTW8 1153 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 FAM160B2Q86V87 743 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 CCDC13Q8IYE1 715 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 ADGRF2Q8IZF7 708 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 GALNT4Q8N4A0 578 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 FRMD1Q8N878 549 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 SYT2Q8N9I0 419 aaPredicted RBP5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 SPERTQ8NA61 448 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 IRF7Q92985 503 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 NACC2Q96BF6 587 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 CNOT6LQ96LI5 555 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 RMDN2Q96LZ7 410 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 FER1L6-AS2Q96M78 137 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 SAMD11Q96NU1 681 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 FAM111AQ96PZ2 611 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 MMP19Q99542 508 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 DPH1Q9BZG8 443 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 ANKRD2Q9GZV1 360 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 NUCKS1Q9H1E3 243 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 DPH5Q9H2P9 285 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 ADAM7Q9H2U9 754 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 WDCPQ9H6R7 721 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 GREM2Q9H772 168 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 VEZTQ9HBM0 779 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 GPAMQ9HCL2 828 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 KCNH7Q9NS40 1196 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 GIMAP4Q9NUV9 329 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 QPCTLQ9NXS2 382 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 HMG20BQ9P0W2 317 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 CLEC1BQ9P126 229 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 TEKT2Q9UIF3 430 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 PRDM4Q9UKN5 801 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 TMPRSS11EQ9UL52 423 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 CA14Q9ULX7 337 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 PCDHGC4Q9Y5F7 938 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 FPGT-TNNI3KV9GXZ4 949 aa5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 ZCCHC6Q5VYS8 1495 aaKnown RBP5.32□□□□□ -1.56
TOPBP1-210ENST00000572787 AKNAQ7Z591 1439 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 IGSF1Q8N6C5 1336 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 SYNGAP1Q96PV0 1343 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 TRBV23OR9-2A0A075B6M9 112 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 SAC3D1A6NKF1 404 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 FAM171A2A8MVW0 826 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 MYO1GB0I1T2 1018 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 SLC27A2O14975 620 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 HNRNPRO43390 633 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 KCNQ3O43525 872 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 F11P03951 625 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 GJB1P08034 283 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 HMOX1P09601 288 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 GNAT1P11488 350 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 FDPSP14324 419 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 EGR1P18146 543 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 PPARGP37231 505 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 GARSP41250 739 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 EPS15P42566 896 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 WDR4P57081 412 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 YPEL5P62699 121 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 ZNF200P98182 395 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 ATP8B2P98198 1209 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 RELQ04864 619 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 RNASELQ05823 741 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 PTP4A2Q12974 167 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 RCN2Q14257 317 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 SLBPQ14493 270 aaKnown RBP eCLIP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 MEP1BQ16820 701 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 FILIP1LQ4L180 1135 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 FIGNQ5HY92 759 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 RAB41Q5JT25 222 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 KCNT1Q5JUK3 1230 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 ZNF574Q6ZN55 896 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 PTCHD4Q6ZW05 846 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 USP49Q70CQ1 688 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 INTS8Q75QN2 995 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 PLPPR4Q7Z2D5 763 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 KRT28Q7Z3Y7 464 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 ADGRG6Q86SQ4 1221 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms