RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 OSCP1Q8WVF1 389 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 HEXIM2Q96MH2 286 aaKnown RBP17.07■□□□□ 0.32
NDE1-205ENST00000572756 DUSP16Q9BY84 665 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 DNAI2Q9GZS0 605 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 CHRDQ9H2X0 955 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 FBXO44Q9H4M3 255 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 GMIPQ9P107 970 aa17.07■□□□□ 0.32
NDE1-205ENST00000572756 CHORDC1Q9UHD1 332 aaPredicted RBP17.07■□□□□ 0.32
NDE1-205ENST00000572756 PROB1E7EW31 1015 aa17.06■□□□□ 0.32
NDE1-205ENST00000572756 LEFTY2O00292 366 aa17.06■□□□□ 0.32
NDE1-205ENST00000572756 FGFR1OPO95684 399 aaKnown RBP17.06■□□□□ 0.32
NDE1-205ENST00000572756 ABL1P00519 1130 aa17.06■□□□□ 0.32
NDE1-205ENST00000572756 TBXAS1P24557 533 aaPredicted RBP17.06■□□□□ 0.32
NDE1-205ENST00000572756 PGFP49763 221 aa17.06■□□□□ 0.32
NDE1-205ENST00000572756 LRMPQ12912 555 aa17.06■□□□□ 0.32
NDE1-205ENST00000572756 EML3Q32P44 896 aa17.06■□□□□ 0.32
NDE1-205ENST00000572756 CC2D1AQ6P1N0 951 aaPredicted RBP17.06■□□□□ 0.32
NDE1-205ENST00000572756 ZFRQ96KR1 1074 aaKnown RBP17.06■□□□□ 0.32
NDE1-205ENST00000572756 NUP62CLQ9H1M0 184 aa17.06■□□□□ 0.32
NDE1-205ENST00000572756 SCML2Q9UQR0 700 aa17.06■□□□□ 0.32
NDE1-205ENST00000572756 CPQQ9Y646 472 aa17.06■□□□□ 0.32
NDE1-205ENST00000572756 WNT6Q9Y6F9 365 aa17.06■□□□□ 0.32
NDE1-205ENST00000572756 COCHO43405 550 aa17.05■□□□□ 0.32
NDE1-205ENST00000572756 AFPP02771 609 aaKnown RBP17.05■□□□□ 0.32
NDE1-205ENST00000572756 CCDC192P0DO97 292 aa17.05■□□□□ 0.32
NDE1-205ENST00000572756 ACO1P21399 889 aaKnown RBP17.05■□□□□ 0.32
NDE1-205ENST00000572756 MRE11P49959 708 aa17.05■□□□□ 0.32
NDE1-205ENST00000572756 KIF11P52732 1056 aa17.05■□□□□ 0.32
NDE1-205ENST00000572756 YWHAEP62258 255 aaKnown RBP17.05■□□□□ 0.32
NDE1-205ENST00000572756 HECTD3Q5T447 861 aa17.05■□□□□ 0.32
NDE1-205ENST00000572756 MAMSTRQ6ZN01 415 aa17.05■□□□□ 0.32
NDE1-205ENST00000572756 IRF2BP1Q8IU81 584 aa17.05■□□□□ 0.32
NDE1-205ENST00000572756 NT5C1BQ96P26 610 aa17.05■□□□□ 0.32
NDE1-205ENST00000572756 IPO9Q96P70 1041 aaKnown RBP17.05■□□□□ 0.32
NDE1-205ENST00000572756 LMAN1LQ9HAT1 526 aa17.05■□□□□ 0.32
NDE1-205ENST00000572756 SPATA6Q9NWH7 488 aaPredicted RBP17.05■□□□□ 0.32
NDE1-205ENST00000572756 DUS2Q9NX74 493 aaKnown RBP17.05■□□□□ 0.32
NDE1-205ENST00000572756 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.05■□□□□ 0.32
NDE1-205ENST00000572756 MYOFQ9NZM1 2061 aa17.05■□□□□ 0.32
NDE1-205ENST00000572756 SP9P0CG40 484 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 IFNAR2P48551 515 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 CETN1Q12798 172 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 MTAPQ13126 283 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 CCINQ13939 588 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 GAS6Q14393 721 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 PON2Q15165 354 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 DPCR1Q3MIW9 517 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 ALYREFQ86V81 257 aaKnown RBP17.04■□□□□ 0.32
NDE1-205ENST00000572756 ANKRD52Q8NB46 1076 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 EHBP1Q8NDI1 1231 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 KAT5Q92993 513 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 ATP2A3Q93084 1043 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 JAKMIP2Q96AA8 810 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 CNOT6LQ96LI5 555 aaKnown RBP17.04■□□□□ 0.32
NDE1-205ENST00000572756 GBP4Q96PP9 640 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 IER2Q9BTL4 223 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 UBXN6Q9BZV1 441 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 LINC00597Q9H2U6 94 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 CCSER2Q9H7U1 834 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 ECT2Q9H8V3 914 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 PRMT8Q9NR22 394 aaPredicted RBP17.04■□□□□ 0.32
NDE1-205ENST00000572756 TLR8Q9NR97 1041 aaKnown RBP17.04■□□□□ 0.32
NDE1-205ENST00000572756 OSER1Q9NX31 292 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 SMPD4Q9NXE4 827 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 USP3Q9Y6I4 520 aa17.04■□□□□ 0.32
NDE1-205ENST00000572756 ZFHX2Q9C0A1 2572 aaPredicted RBP17.04■□□□□ 0.32
NDE1-205ENST00000572756 ATG2BQ96BY7 2078 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 TRDMT1O14717 391 aaKnown RBP17.03■□□□□ 0.32
NDE1-205ENST00000572756 CYP26A1O43174 497 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 LAMTOR5O43504 91 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 MBL2P11226 248 aaPredicted RBP17.03■□□□□ 0.32
NDE1-205ENST00000572756 GCNT1Q02742 428 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 ZNF528Q3MIS6 628 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 CCDC186Q7Z3E2 898 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 TTC30AQ86WT1 665 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 DDX42Q86XP3 938 aaKnown RBP eCLIP17.03■□□□□ 0.32
NDE1-205ENST00000572756 ARHGEF19Q8IW93 802 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 PPM1KQ8N3J5 372 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 CPA6Q8N4T0 437 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 TTC16Q8NEE8 873 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 GPT2Q8TD30 523 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 CYLDQ9NQC7 956 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 RBM12Q9NTZ6 932 aaKnown RBP17.03■□□□□ 0.32
NDE1-205ENST00000572756 FBXO4Q9UKT5 387 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 KIAA1549LQ6ZVL6 1849 aa17.03■□□□□ 0.32
NDE1-205ENST00000572756 TLR5O60602 858 aa17.02■□□□□ 0.32
NDE1-205ENST00000572756 PAEPP09466 180 aa17.02■□□□□ 0.32
NDE1-205ENST00000572756 GJA4P35212 333 aa17.02■□□□□ 0.32
NDE1-205ENST00000572756 LRRC32Q14392 662 aa17.02■□□□□ 0.32
NDE1-205ENST00000572756 SGO2Q562F6 1265 aa17.02■□□□□ 0.32
NDE1-205ENST00000572756 TMEM196Q5HYL7 178 aa17.02■□□□□ 0.32
NDE1-205ENST00000572756 RAB41Q5JT25 222 aa17.02■□□□□ 0.32
NDE1-205ENST00000572756 DGKKQ5KSL6 1271 aa17.02■□□□□ 0.32
NDE1-205ENST00000572756 KREMEN1Q96MU8 473 aa17.02■□□□□ 0.32
NDE1-205ENST00000572756 INTS2Q9H0H0 1204 aaKnown RBP17.02■□□□□ 0.32
NDE1-205ENST00000572756 NMUR1Q9HB89 426 aa17.02■□□□□ 0.32
NDE1-205ENST00000572756 CFAP97Q9P2B7 532 aa17.02■□□□□ 0.32
NDE1-205ENST00000572756 TSPAN16Q9UKR8 245 aa17.02■□□□□ 0.32
NDE1-205ENST00000572756 RIF1Q5UIP0 2472 aaKnown RBP17.01■□□□□ 0.31
NDE1-205ENST00000572756 E2F8A0AVK6 867 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms