RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 GATA6Q92908 595 aa17.1■□□□□ 0.33
HCFC1R1-203ENST00000572355 FBXO32Q969P5 355 aa17.1■□□□□ 0.33
HCFC1R1-203ENST00000572355 ELOVL4Q9GZR5 314 aa17.1■□□□□ 0.33
HCFC1R1-203ENST00000572355 SLC32A1Q9H598 525 aa17.1■□□□□ 0.33
HCFC1R1-203ENST00000572355 TMEM30AQ9NV96 361 aa17.1■□□□□ 0.33
HCFC1R1-203ENST00000572355 TMEM8BA6NDV4 472 aa17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 CLDN5O00501 218 aa17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 HYAL3O43820 417 aaPredicted RBP17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 ADAM23O75077 832 aa17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 PTPN1P18031 435 aaKnown RBP17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 TNNI1P19237 187 aa17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 ITPKAP23677 461 aa17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 GNL1P36915 607 aaPredicted RBP17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 GRIA2P42262 883 aa17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 TNNC1P63316 161 aa17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 MAP7D1Q3KQU3 841 aa17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 DEFB119Q8N690 84 aa17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 KIAA1958Q8N8K9 716 aa17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 NAT16Q8N8M0 369 aa17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 RDH13Q8NBN7 331 aa17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 TBC1D14Q9P2M4 693 aa17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 CEP295Q9C0D2 2601 aa17.09■□□□□ 0.33
HCFC1R1-203ENST00000572355 ASCC3Q8N3C0 2202 aaKnown RBP17.08■□□□□ 0.33
HCFC1R1-203ENST00000572355 SPAARA0A1B0GVQ0 90 aa17.08■□□□□ 0.32
HCFC1R1-203ENST00000572355 K7ELQ4 463 aaPredicted RBP17.08■□□□□ 0.32
HCFC1R1-203ENST00000572355 COCHO43405 550 aa17.08■□□□□ 0.32
HCFC1R1-203ENST00000572355 ATXN3P54252 364 aaPredicted RBP17.08■□□□□ 0.32
HCFC1R1-203ENST00000572355 WDR72Q3MJ13 1102 aa17.08■□□□□ 0.32
HCFC1R1-203ENST00000572355 PHTF2Q8N3S3 785 aa17.08■□□□□ 0.32
HCFC1R1-203ENST00000572355 ZNF513Q8N8E2 541 aaPredicted RBP17.08■□□□□ 0.32
HCFC1R1-203ENST00000572355 GTPBP2Q9BX10 602 aaKnown RBP17.08■□□□□ 0.32
HCFC1R1-203ENST00000572355 SH3BP1Q9Y3L3 701 aa17.08■□□□□ 0.32
HCFC1R1-203ENST00000572355 TBC1D3BA6NDS4 549 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 A8MXQ7 604 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 TACC1O75410 805 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 CLSTN1O94985 981 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 CST3P01034 146 aaPredicted RBP17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 IRF1P10914 325 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 YWHAQP27348 245 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 TNFRSF4P43489 277 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 SIM1P81133 766 aaPredicted RBP17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 RPL6Q02878 288 aaKnown RBP17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 GAD2Q05329 585 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 BYSLQ13895 437 aaKnown RBP17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 SNRNP35Q16560 246 aaKnown RBP17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 C10orf76Q5T2E6 689 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 BTBD8Q5XKL5 378 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 SLC23A3Q6PIS1 610 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 NUP93Q8N1F7 819 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 B3GALNT2Q8NCR0 500 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 PDZD8Q8NEN9 1154 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 CCDC127Q96BQ5 260 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 CGRRF1Q99675 332 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 B3GNT5Q9BYG0 378 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 KIAA1586Q9HCI6 787 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 NXF1Q9UBU9 619 aaKnown RBP17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 PILRBQ9UKJ0 227 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 KLK13Q9UKR3 277 aa17.07■□□□□ 0.32
HCFC1R1-203ENST00000572355 SPEGQ15772 3267 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 E2F8A0AVK6 867 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 SRRM3A6NNA2 597 aaPredicted RBP17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 AP5Z1O43299 807 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 RTN3O95197 1032 aaPredicted RBP17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 HOXB3P14651 431 aaPredicted RBP17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 HOXB2P14652 356 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 PDCP20941 246 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 HOXD13P35453 343 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 DPP6P42658 865 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 WASP42768 502 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 CYP2J2P51589 502 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 COL9A2Q14055 689 aaPredicted RBP17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 ANO4Q32M45 955 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 TRMT11Q7Z4G4 463 aaKnown RBP17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 HDDC3Q8N4P3 179 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 ERLEC1Q96DZ1 483 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 ZFRQ96KR1 1074 aaKnown RBP17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 CCSER2Q9H7U1 834 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 AGPAT3Q9NRZ7 376 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 CALCOCO1Q9P1Z2 691 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 NEUROG3Q9Y4Z2 214 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 PI4KAP42356 2102 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 PCDH15Q96QU1 1955 aa17.06■□□□□ 0.32
HCFC1R1-203ENST00000572355 ASPMQ8IZT6 3477 aa17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 ATP8B3O60423 1300 aa17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 FAM208BQ5VWN6 2430 aa17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 A0A0A0MRY4 1105 aa17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 CLIC2O15247 247 aa17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 EIF3DO15371 548 aaKnown RBP eCLIP17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 TULP3O75386 442 aa17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 GABRG2P18507 467 aa17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 SLC5A3P53794 718 aa17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 MYL6P60660 151 aa17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 ASIC1P78348 528 aa17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 GFPT1Q06210 699 aaPredicted RBP17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 CYP24A1Q07973 514 aa17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 TRPC3Q13507 836 aa17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 PSMD6Q15008 389 aa17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 DUOXA1Q1HG43 343 aa17.05■□□□□ 0.32
HCFC1R1-203ENST00000572355 SPDYCQ5MJ68 293 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms