RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 SLC9A3R1O14745 358 aaPredicted RBP18.37■□□□□ 0.53
LITAF-211ENST00000572255 SCAMP3O14828 347 aaKnown RBP18.37■□□□□ 0.53
LITAF-211ENST00000572255 LRP3O75074 770 aa18.37■□□□□ 0.53
LITAF-211ENST00000572255 CYP17A1P05093 508 aa18.37■□□□□ 0.53
LITAF-211ENST00000572255 MBL2P11226 248 aaPredicted RBP18.37■□□□□ 0.53
LITAF-211ENST00000572255 KRT13P13646 458 aa18.37■□□□□ 0.53
LITAF-211ENST00000572255 GCLMP48507 274 aa18.37■□□□□ 0.53
LITAF-211ENST00000572255 GAB4Q2WGN9 574 aa18.37■□□□□ 0.53
LITAF-211ENST00000572255 DDX42Q86XP3 938 aaKnown RBP eCLIP18.37■□□□□ 0.53
LITAF-211ENST00000572255 RPLP0P6Q8NHW5 317 aa18.37■□□□□ 0.53
LITAF-211ENST00000572255 SLC2A14Q8TDB8 520 aa18.37■□□□□ 0.53
LITAF-211ENST00000572255 SMOQ99835 787 aa18.37■□□□□ 0.53
LITAF-211ENST00000572255 IMPG2Q9BZV3 1241 aa18.37■□□□□ 0.53
LITAF-211ENST00000572255 FAM49BQ9NUQ9 324 aa18.37■□□□□ 0.53
LITAF-211ENST00000572255 CHORDC1Q9UHD1 332 aaPredicted RBP18.37■□□□□ 0.53
LITAF-211ENST00000572255 EML5Q05BV3 1969 aa18.37■□□□□ 0.53
LITAF-211ENST00000572255 PRR5-ARHGAP8B1AHC4 643 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 COCHO43405 550 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 RPL13P26373 211 aaKnown RBP18.36■□□□□ 0.53
LITAF-211ENST00000572255 PSMC2P35998 433 aaKnown RBP18.36■□□□□ 0.53
LITAF-211ENST00000572255 OPRD1P41143 372 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 ARHGAP8P85298 464 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 PPP3CAQ08209 521 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 ZCWPW2Q504Y3 356 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 HECTD3Q5T447 861 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 CAMKK1Q8N5S9 505 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 FAM160A2Q8N612 972 aaPredicted RBP18.36■□□□□ 0.53
LITAF-211ENST00000572255 C12orf29Q8N999 325 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 ZMIZ2Q8NF64 920 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 TAS1R2Q8TE23 839 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 GAB3Q8WWW8 586 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 HHIPQ96QV1 700 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 COMMD8Q9NX08 183 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 GMIPQ9P107 970 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 DNAH14Q0VDD8 3507 aa18.36■□□□□ 0.53
LITAF-211ENST00000572255 FAM92AA1XBS5 289 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 RPP40O75818 363 aaKnown RBP18.35■□□□□ 0.53
LITAF-211ENST00000572255 BEST1O76090 585 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 SDHBP21912 280 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 MAP3K7CLP57077 242 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 ENPEPQ07075 957 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 INCA1Q0VD86 236 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 ADAM9Q13443 819 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 DHCR24Q15392 516 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 SNX30Q5VWJ9 437 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 SYT13Q7L8C5 426 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 ADGRG2Q8IZP9 1017 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 ACDQ96AP0 544 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 CCDC34Q96HJ3 373 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 ZFRQ96KR1 1074 aaKnown RBP18.35■□□□□ 0.53
LITAF-211ENST00000572255 TWNKQ96RR1 684 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 CCSER2Q9H7U1 834 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 MMRN2Q9H8L6 949 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 APOBEC3GQ9HC16 384 aaKnown RBP18.35■□□□□ 0.53
LITAF-211ENST00000572255 CSNK1G1Q9HCP0 422 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 MYOFQ9NZM1 2061 aa18.35■□□□□ 0.53
LITAF-211ENST00000572255 ZDHHC11BP0C7U3 371 aa18.34■□□□□ 0.53
LITAF-211ENST00000572255 FAM200BP0CF97 657 aa18.34■□□□□ 0.53
LITAF-211ENST00000572255 TRIM21P19474 475 aaKnown RBP18.34■□□□□ 0.53
LITAF-211ENST00000572255 ADORA2BP29275 332 aa18.34■□□□□ 0.53
LITAF-211ENST00000572255 TUBP50607 506 aa18.34■□□□□ 0.53
LITAF-211ENST00000572255 DMC1Q14565 340 aa18.34■□□□□ 0.53
LITAF-211ENST00000572255 EDRF1Q3B7T1 1238 aa18.34■□□□□ 0.53
LITAF-211ENST00000572255 SMYD4Q8IYR2 804 aaPredicted RBP18.34■□□□□ 0.53
LITAF-211ENST00000572255 CCDC26Q8TAB7 109 aa18.34■□□□□ 0.53
LITAF-211ENST00000572255 NIF3L1Q9GZT8 377 aa18.34■□□□□ 0.53
LITAF-211ENST00000572255 CYP3A43Q9HB55 503 aa18.34■□□□□ 0.53
LITAF-211ENST00000572255 TMEM8AQ9HCN3 771 aa18.34■□□□□ 0.53
LITAF-211ENST00000572255 SEMA4GQ9NTN9 838 aa18.34■□□□□ 0.53
LITAF-211ENST00000572255 CDV3Q9UKY7 258 aaKnown RBP18.34■□□□□ 0.53
LITAF-211ENST00000572255 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.34■□□□□ 0.53
LITAF-211ENST00000572255 SDK1Q7Z5N4 2213 aa18.34■□□□□ 0.53
LITAF-211ENST00000572255 E2F8A0AVK6 867 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 K7EQS6 105 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 AXIN1O15169 862 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 APBB3O95704 486 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 ADH1CP00326 375 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 CCDC192P0DO97 292 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 PGFP49763 221 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 SEC13P55735 322 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 PNOCQ13519 176 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 CSRP2Q16527 193 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 RHBDF2Q6PJF5 856 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 CACNA2D4Q7Z3S7 1137 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 KBTBD6Q86V97 674 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 USP33Q8TEY7 942 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 HNRNPABQ99729 332 aaKnown RBP18.33■□□□□ 0.52
LITAF-211ENST00000572255 NT5C1AQ9BXI3 368 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 FBXO44Q9H4M3 255 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 TBC1D14Q9P2M4 693 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 NCOR2Q9Y618 2525 aa18.33■□□□□ 0.52
LITAF-211ENST00000572255 MED19A0JLT2 244 aaPredicted RBP18.32■□□□□ 0.52
LITAF-211ENST00000572255 ADH5P11766 374 aa18.32■□□□□ 0.52
LITAF-211ENST00000572255 CD58P19256 250 aa18.32■□□□□ 0.52
LITAF-211ENST00000572255 GTF2H1P32780 548 aa18.32■□□□□ 0.52
LITAF-211ENST00000572255 SLC6A11P48066 632 aa18.32■□□□□ 0.52
LITAF-211ENST00000572255 ATXN1P54253 815 aaKnown RBP18.32■□□□□ 0.52
LITAF-211ENST00000572255 MCCD1P59942 119 aaPredicted RBP18.32■□□□□ 0.52
LITAF-211ENST00000572255 C2orf27AQ580R0 203 aa18.32■□□□□ 0.52
LITAF-211ENST00000572255 PRR23CQ6ZRP0 262 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms