RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 BCCIPQ9P287 314 aaKnown RBP eCLIP20.43■□□□□ 0.86
NUP88-203ENST00000572019 PILRBQ9UKJ0 227 aa20.43■□□□□ 0.86
NUP88-203ENST00000572019 FASNP49327 2511 aaKnown RBP20.42■□□□□ 0.86
NUP88-203ENST00000572019 TRIM66O15016 1216 aa20.42■□□□□ 0.86
NUP88-203ENST00000572019 MAP3K13O43283 966 aa20.42■□□□□ 0.86
NUP88-203ENST00000572019 TNNC2P02585 160 aa20.42■□□□□ 0.86
NUP88-203ENST00000572019 PGFP49763 221 aa20.42■□□□□ 0.86
NUP88-203ENST00000572019 PDE6CP51160 858 aa20.42■□□□□ 0.86
NUP88-203ENST00000572019 DUOXA2Q1HG44 320 aa20.42■□□□□ 0.86
NUP88-203ENST00000572019 TRAPPC11Q7Z392 1133 aa20.42■□□□□ 0.86
NUP88-203ENST00000572019 ETFBKMTQ8IXQ9 262 aa20.42■□□□□ 0.86
NUP88-203ENST00000572019 CD93Q9NPY3 652 aa20.42■□□□□ 0.86
NUP88-203ENST00000572019 HSPBP1Q9NZL4 362 aa20.42■□□□□ 0.86
NUP88-203ENST00000572019 PLXNB3Q9ULL4 1909 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 ZNF233A6NK53 670 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 COCHO43405 550 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 ALDH1A2O94788 518 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 PTPN1P18031 435 aaKnown RBP20.41■□□□□ 0.86
NUP88-203ENST00000572019 GABRG2P18507 467 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 GNL1P36915 607 aaPredicted RBP20.41■□□□□ 0.86
NUP88-203ENST00000572019 EIF2DP41214 584 aaKnown RBP20.41■□□□□ 0.86
NUP88-203ENST00000572019 STAT6P42226 847 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 WASP42768 502 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 SEMA3BQ13214 749 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 MAPRE1Q15691 268 aaKnown RBP20.41■□□□□ 0.86
NUP88-203ENST00000572019 EOGTQ5NDL2 527 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 PEAR1Q5VY43 1037 aaPredicted RBP20.41■□□□□ 0.86
NUP88-203ENST00000572019 LYSMD4Q5XG99 296 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 SLC23A3Q6PIS1 610 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 PGBD3Q8N328 593 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 RDH13Q8NBN7 331 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 OR6B3Q8NGW1 331 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 SCAMP5Q8TAC9 235 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 ZNF516Q92618 1163 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 CEP295NLQ96MC4 621 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 KCNK16Q96T55 309 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 NUSAP1Q9BXS6 441 aaKnown RBP20.41■□□□□ 0.86
NUP88-203ENST00000572019 TRIM9Q9C026 710 aa20.41■□□□□ 0.86
NUP88-203ENST00000572019 DSPP15924 2871 aaKnown RBP20.41■□□□□ 0.86
NUP88-203ENST00000572019 CFIP05156 583 aa20.4■□□□□ 0.86
NUP88-203ENST00000572019 GRIA2P42262 883 aa20.4■□□□□ 0.86
NUP88-203ENST00000572019 SIM1P81133 766 aaPredicted RBP20.4■□□□□ 0.86
NUP88-203ENST00000572019 LMAN2Q12907 356 aa20.4■□□□□ 0.86
NUP88-203ENST00000572019 ALCAMQ13740 583 aa20.4■□□□□ 0.86
NUP88-203ENST00000572019 TDRD10Q5VZ19 366 aaKnown RBP20.4■□□□□ 0.86
NUP88-203ENST00000572019 WDR49Q8IV35 697 aa20.4■□□□□ 0.86
NUP88-203ENST00000572019 BBS7Q8IWZ6 715 aa20.4■□□□□ 0.86
NUP88-203ENST00000572019 PDILTQ8N807 584 aa20.4■□□□□ 0.86
NUP88-203ENST00000572019 SPACA7Q96KW9 195 aa20.4■□□□□ 0.86
NUP88-203ENST00000572019 ACOX2Q99424 681 aa20.4■□□□□ 0.86
NUP88-203ENST00000572019 SNX25Q9H3E2 840 aa20.4■□□□□ 0.86
NUP88-203ENST00000572019 CCSER2Q9H7U1 834 aa20.4■□□□□ 0.86
NUP88-203ENST00000572019 POLMQ9NP87 494 aaPredicted RBP20.4■□□□□ 0.86
NUP88-203ENST00000572019 CHORDC1Q9UHD1 332 aaPredicted RBP20.4■□□□□ 0.86
NUP88-203ENST00000572019 TAF4O00268 1085 aa20.39■□□□□ 0.85
NUP88-203ENST00000572019 SLC9A3R1O14745 358 aaPredicted RBP20.39■□□□□ 0.85
NUP88-203ENST00000572019 TGFB1I1O43294 461 aa20.39■□□□□ 0.85
NUP88-203ENST00000572019 TULP3O75386 442 aa20.39■□□□□ 0.85
NUP88-203ENST00000572019 ADH1CP00326 375 aa20.39■□□□□ 0.85
NUP88-203ENST00000572019 DLATP10515 647 aaKnown RBP20.39■□□□□ 0.85
NUP88-203ENST00000572019 RING1Q06587 406 aa20.39■□□□□ 0.85
NUP88-203ENST00000572019 PAQR9Q6ZVX9 377 aa20.39■□□□□ 0.85
NUP88-203ENST00000572019 TMEM25Q86YD3 366 aa20.39■□□□□ 0.85
NUP88-203ENST00000572019 KIAA1958Q8N8K9 716 aa20.39■□□□□ 0.85
NUP88-203ENST00000572019 GTPBP2Q9BX10 602 aaKnown RBP20.39■□□□□ 0.85
NUP88-203ENST00000572019 CAPN10Q9HC96 672 aa20.39■□□□□ 0.85
NUP88-203ENST00000572019 CD248Q9HCU0 757 aa20.39■□□□□ 0.85
NUP88-203ENST00000572019 CALCOCO1Q9P1Z2 691 aa20.39■□□□□ 0.85
NUP88-203ENST00000572019 NEUROG3Q9Y4Z2 214 aa20.39■□□□□ 0.85
NUP88-203ENST00000572019 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.39■□□□□ 0.85
NUP88-203ENST00000572019 ADAMTS20P59510 1910 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 TACC1O75410 805 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 YWHAQP27348 245 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 TNFRSF4P43489 277 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 PPP3CCP48454 512 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 CDH8P55286 799 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 MYL6P60660 151 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 HSF5Q4G112 596 aaPredicted RBP20.38■□□□□ 0.85
NUP88-203ENST00000572019 CCDC73Q6ZRK6 1079 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 SLC41A1Q8IVJ1 513 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 ZNF513Q8N8E2 541 aaPredicted RBP20.38■□□□□ 0.85
NUP88-203ENST00000572019 B3GALNT2Q8NCR0 500 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 FBXO32Q969P5 355 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 CCDC127Q96BQ5 260 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 SLITRK1Q96PX8 696 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 USP28Q96RU2 1077 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 XYLT2Q9H1B5 865 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 SLC6A17Q9H1V8 727 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 SMYD3Q9H7B4 428 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 R3HCC1Q9Y3T6 440 aaKnown RBP20.38■□□□□ 0.85
NUP88-203ENST00000572019 FREM2Q5SZK8 3169 aa20.38■□□□□ 0.85
NUP88-203ENST00000572019 A0A1W2PQF6 199 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 E2F8A0AVK6 867 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 TBC1D3BA6NDS4 549 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 TMEM8BA6NDV4 472 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 CLIC2O15247 247 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 TXLNAP40222 546 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 RPL6Q02878 288 aaKnown RBP20.37■□□□□ 0.85
NUP88-203ENST00000572019 SNRNP35Q16560 246 aaKnown RBP20.37■□□□□ 0.85
NUP88-203ENST00000572019 WDR72Q3MJ13 1102 aa20.37■□□□□ 0.85
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