RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 CASD1Q96PB1 797 aa20.34■□□□□ 0.85
RPAIN-210ENST00000571613 TMEM175Q9BSA9 504 aa20.34■□□□□ 0.85
RPAIN-210ENST00000571613 NGRNQ9NPE2 291 aaKnown RBP20.34■□□□□ 0.85
RPAIN-210ENST00000571613 FAM53CQ9NYF3 392 aa20.34■□□□□ 0.85
RPAIN-210ENST00000571613 PCSK1NQ9UHG2 260 aa20.34■□□□□ 0.85
RPAIN-210ENST00000571613 STAP1Q9ULZ2 295 aa20.34■□□□□ 0.85
RPAIN-210ENST00000571613 ESYT3A0FGR9 886 aa20.33■□□□□ 0.85
RPAIN-210ENST00000571613 ZSCAN5CA6NGD5 496 aaPredicted RBP20.33■□□□□ 0.85
RPAIN-210ENST00000571613 PI4K2BG5E9Z4 385 aa20.33■□□□□ 0.85
RPAIN-210ENST00000571613 DAB1O75553 588 aa20.33■□□□□ 0.85
RPAIN-210ENST00000571613 OAZ2O95190 189 aa20.33■□□□□ 0.85
RPAIN-210ENST00000571613 YWHAZP63104 245 aaKnown RBP20.33■□□□□ 0.85
RPAIN-210ENST00000571613 ELAVL2Q12926 359 aaKnown RBP20.33■□□□□ 0.85
RPAIN-210ENST00000571613 TAF5Q15542 800 aa20.33■□□□□ 0.85
RPAIN-210ENST00000571613 RAB41Q5JT25 222 aa20.33■□□□□ 0.85
RPAIN-210ENST00000571613 TXNRD3NBQ6F5E7 133 aa20.33■□□□□ 0.85
RPAIN-210ENST00000571613 TRNP1Q6NT89 227 aa20.33■□□□□ 0.85
RPAIN-210ENST00000571613 TTC27Q6P3X3 843 aa20.33■□□□□ 0.85
RPAIN-210ENST00000571613 SND1Q7KZF4 910 aaKnown RBP eCLIP20.33■□□□□ 0.85
RPAIN-210ENST00000571613 DCP1BQ8IZD4 617 aaKnown RBP20.33■□□□□ 0.85
RPAIN-210ENST00000571613 C1orf54Q8WWF1 131 aa20.33■□□□□ 0.85
RPAIN-210ENST00000571613 PKMYT1Q99640 499 aa20.33■□□□□ 0.85
RPAIN-210ENST00000571613 HINFPQ9BQA5 517 aa20.33■□□□□ 0.85
RPAIN-210ENST00000571613 TRIM62Q9BVG3 475 aa20.33■□□□□ 0.85
RPAIN-210ENST00000571613 DMAP1Q9NPF5 467 aaPredicted RBP20.33■□□□□ 0.85
RPAIN-210ENST00000571613 CENPFP49454 3210 aa20.33■□□□□ 0.85
RPAIN-210ENST00000571613 MDM4O15151 490 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 SASH3O75995 380 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 NOS2P35228 1153 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 GJA8P48165 433 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 TKTL1P51854 596 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 ATP11AP98196 1134 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 ADCY1Q08828 1119 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 PPP1R7Q15435 360 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 CDO1Q16878 200 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 C15orf59Q2T9L4 293 aaPredicted RBP20.32■□□□□ 0.84
RPAIN-210ENST00000571613 KAZNQ674X7 775 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 KRT222Q8N1A0 295 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 SCML4Q8N228 414 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 CCHCR1Q8TD31 782 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 IRGQQ8WZA9 623 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 SMOQ99835 787 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 C11orf84Q9BUA3 381 aaPredicted RBP20.32■□□□□ 0.84
RPAIN-210ENST00000571613 MAK16Q9BXY0 300 aaKnown RBP20.32■□□□□ 0.84
RPAIN-210ENST00000571613 KLHL11Q9NVR0 708 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 RRN3Q9NYV6 651 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 C3orf70A6NLC5 250 aaPredicted RBP20.32■□□□□ 0.84
RPAIN-210ENST00000571613 ZNF487B1APH4 448 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 DAPK3O43293 454 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 BEST1O76090 585 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 ENDOD1O94919 500 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 ITGB1P05556 798 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 CCL23P55773 120 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 TFDP2Q14188 446 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 NFE2Q16621 373 aaPredicted RBP20.32■□□□□ 0.84
RPAIN-210ENST00000571613 SMTNL2Q2TAL5 461 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 SLC25A52Q3SY17 297 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 KCNT1Q5JUK3 1230 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 CNKSR3Q6P9H4 555 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 BBS12Q6ZW61 710 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 GSPT2Q8IYD1 628 aaKnown RBP20.32■□□□□ 0.84
RPAIN-210ENST00000571613 MREGQ8N565 214 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 FAM149B1Q96BN6 582 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 LRRC45Q96CN5 670 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 SCLYQ96I15 445 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 OXCT2Q9BYC2 517 aaPredicted RBP20.32■□□□□ 0.84
RPAIN-210ENST00000571613 PLEKHA4Q9H4M7 779 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 NRDE2Q9H7Z3 1164 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 POPDC2Q9HBU9 364 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 CHST7Q9NS84 486 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 ADAM28Q9UKQ2 775 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 TBX21Q9UL17 535 aa20.32■□□□□ 0.84
RPAIN-210ENST00000571613 DRG1Q9Y295 367 aaKnown RBP20.32■□□□□ 0.84
RPAIN-210ENST00000571613 KRT10P13645 584 aa20.31■□□□□ 0.84
RPAIN-210ENST00000571613 IKBKEQ14164 716 aa20.31■□□□□ 0.84
RPAIN-210ENST00000571613 LLGL1Q15334 1064 aa20.31■□□□□ 0.84
RPAIN-210ENST00000571613 SCYL2Q6P3W7 929 aa20.31■□□□□ 0.84
RPAIN-210ENST00000571613 SPATA2LQ8IUW3 424 aaPredicted RBP20.31■□□□□ 0.84
RPAIN-210ENST00000571613 PSTKQ8IV42 348 aaKnown RBP20.31■□□□□ 0.84
RPAIN-210ENST00000571613 CRIPAKQ8N1N5 446 aa20.31■□□□□ 0.84
RPAIN-210ENST00000571613 CLEC4CQ8WTT0 213 aa20.31■□□□□ 0.84
RPAIN-210ENST00000571613 HSPH1Q92598 858 aa20.31■□□□□ 0.84
RPAIN-210ENST00000571613 HERPUD2Q9BSE4 406 aa20.31■□□□□ 0.84
RPAIN-210ENST00000571613 TRIM51Q9BSJ1 452 aa20.31■□□□□ 0.84
RPAIN-210ENST00000571613 PPP1R12CQ9BZL4 782 aa20.31■□□□□ 0.84
RPAIN-210ENST00000571613 TMEM39AQ9NV64 488 aa20.31■□□□□ 0.84
RPAIN-210ENST00000571613 FAN1Q9Y2M0 1017 aa20.31■□□□□ 0.84
RPAIN-210ENST00000571613 PRG3Q9Y2Y8 225 aaPredicted RBP20.31■□□□□ 0.84
RPAIN-210ENST00000571613 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.3■□□□□ 0.84
RPAIN-210ENST00000571613 NDC80O14777 642 aa20.3■□□□□ 0.84
RPAIN-210ENST00000571613 NRP1O14786 923 aa20.3■□□□□ 0.84
RPAIN-210ENST00000571613 CDH6P55285 790 aa20.3■□□□□ 0.84
RPAIN-210ENST00000571613 HDAC4P56524 1084 aa20.3■□□□□ 0.84
RPAIN-210ENST00000571613 KRT81Q14533 505 aa20.3■□□□□ 0.84
RPAIN-210ENST00000571613 LRRC43Q8N309 656 aa20.3■□□□□ 0.84
RPAIN-210ENST00000571613 CCDC89Q8N998 374 aa20.3■□□□□ 0.84
RPAIN-210ENST00000571613 OR10T2Q8NGX3 314 aa20.3■□□□□ 0.84
RPAIN-210ENST00000571613 FUBP3Q96I24 572 aaKnown RBP eCLIP20.3■□□□□ 0.84
RPAIN-210ENST00000571613 CCDC114Q96M63 670 aa20.3■□□□□ 0.84
RPAIN-210ENST00000571613 SLC2A13Q96QE2 648 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms