RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 TMEM74BQ9NUR3 256 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 MBD1Q9UIS9 605 aaPredicted RBP20.21■□□□□ 0.83
SCARF1-204ENST00000570902 PILRBQ9UKJ0 227 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 ZZEF1O43149 2961 aa20.21■□□□□ 0.83
SCARF1-204ENST00000570902 SPEGQ15772 3267 aa20.2■□□□□ 0.82
SCARF1-204ENST00000570902 SCAMP3O14828 347 aaKnown RBP20.2■□□□□ 0.82
SCARF1-204ENST00000570902 AP5Z1O43299 807 aa20.2■□□□□ 0.82
SCARF1-204ENST00000570902 ADAM23O75077 832 aa20.2■□□□□ 0.82
SCARF1-204ENST00000570902 RDXP35241 583 aaKnown RBP20.2■□□□□ 0.82
SCARF1-204ENST00000570902 MESP2Q0VG99 397 aa20.2■□□□□ 0.82
SCARF1-204ENST00000570902 EMC10Q5UCC4 262 aa20.2■□□□□ 0.82
SCARF1-204ENST00000570902 BTBD8Q5XKL5 378 aa20.2■□□□□ 0.82
SCARF1-204ENST00000570902 NUDT18Q6ZVK8 323 aa20.2■□□□□ 0.82
SCARF1-204ENST00000570902 TRAPPC11Q7Z392 1133 aa20.2■□□□□ 0.82
SCARF1-204ENST00000570902 RABEPKQ7Z6M1 372 aa20.2■□□□□ 0.82
SCARF1-204ENST00000570902 HDDC3Q8N4P3 179 aa20.2■□□□□ 0.82
SCARF1-204ENST00000570902 FRMD1Q8N878 549 aa20.2■□□□□ 0.82
SCARF1-204ENST00000570902 ZCCHC14Q8WYQ9 949 aaKnown RBP20.2■□□□□ 0.82
SCARF1-204ENST00000570902 OVCA2Q8WZ82 227 aa20.2■□□□□ 0.82
SCARF1-204ENST00000570902 MRPL45Q9BRJ2 306 aaKnown RBP20.2■□□□□ 0.82
SCARF1-204ENST00000570902 HSPBP1Q9NZL4 362 aa20.2■□□□□ 0.82
SCARF1-204ENST00000570902 WDFY3Q8IZQ1 3526 aa20.2■□□□□ 0.82
SCARF1-204ENST00000570902 TNRC6BQ9UPQ9 1833 aaKnown RBP20.2■□□□□ 0.82
SCARF1-204ENST00000570902 TBC1D3BA6NDS4 549 aa20.19■□□□□ 0.82
SCARF1-204ENST00000570902 SRRM3A6NNA2 597 aaPredicted RBP20.19■□□□□ 0.82
SCARF1-204ENST00000570902 RTN3O95197 1032 aaPredicted RBP20.19■□□□□ 0.82
SCARF1-204ENST00000570902 CFIP05156 583 aa20.19■□□□□ 0.82
SCARF1-204ENST00000570902 PTPN1P18031 435 aaKnown RBP20.19■□□□□ 0.82
SCARF1-204ENST00000570902 PDCP20941 246 aa20.19■□□□□ 0.82
SCARF1-204ENST00000570902 YWHAQP27348 245 aa20.19■□□□□ 0.82
SCARF1-204ENST00000570902 TNNC1P63316 161 aa20.19■□□□□ 0.82
SCARF1-204ENST00000570902 SEMA3BQ13214 749 aa20.19■□□□□ 0.82
SCARF1-204ENST00000570902 DUOXA1Q1HG43 343 aa20.19■□□□□ 0.82
SCARF1-204ENST00000570902 LY6G5CQ5SRR4 150 aa20.19■□□□□ 0.82
SCARF1-204ENST00000570902 KIAA1211LQ6NV74 962 aa20.19■□□□□ 0.82
SCARF1-204ENST00000570902 SLC36A4Q6YBV0 504 aa20.19■□□□□ 0.82
SCARF1-204ENST00000570902 NUP93Q8N1F7 819 aa20.19■□□□□ 0.82
SCARF1-204ENST00000570902 SLC6A14Q9UN76 642 aa20.19■□□□□ 0.82
SCARF1-204ENST00000570902 MSRB2Q9Y3D2 182 aa20.19■□□□□ 0.82
SCARF1-204ENST00000570902 PLXND1Q9Y4D7 1925 aa20.19■□□□□ 0.82
SCARF1-204ENST00000570902 IGF2RP11717 2491 aa20.18■□□□□ 0.82
SCARF1-204ENST00000570902 H0Y626 953 aa20.18■□□□□ 0.82
SCARF1-204ENST00000570902 HYAL3O43820 417 aaPredicted RBP20.18■□□□□ 0.82
SCARF1-204ENST00000570902 TRIM16O95361 564 aa20.18■□□□□ 0.82
SCARF1-204ENST00000570902 TNNI1P19237 187 aa20.18■□□□□ 0.82
SCARF1-204ENST00000570902 ITPKAP23677 461 aa20.18■□□□□ 0.82
SCARF1-204ENST00000570902 RPL6Q02878 288 aaKnown RBP20.18■□□□□ 0.82
SCARF1-204ENST00000570902 GFPT1Q06210 699 aaPredicted RBP20.18■□□□□ 0.82
SCARF1-204ENST00000570902 IFRD2Q12894 506 aaPredicted RBP20.18■□□□□ 0.82
SCARF1-204ENST00000570902 WDR72Q3MJ13 1102 aa20.18■□□□□ 0.82
SCARF1-204ENST00000570902 PIP4P1Q86T03 277 aa20.18■□□□□ 0.82
SCARF1-204ENST00000570902 PHTF2Q8N3S3 785 aa20.18■□□□□ 0.82
SCARF1-204ENST00000570902 DUSP9Q99956 384 aaKnown RBP20.18■□□□□ 0.82
SCARF1-204ENST00000570902 LRRC27Q9C0I9 530 aa20.18■□□□□ 0.82
SCARF1-204ENST00000570902 DEC1Q9P2X7 70 aa20.18■□□□□ 0.82
SCARF1-204ENST00000570902 SH3BP1Q9Y3L3 701 aa20.18■□□□□ 0.82
SCARF1-204ENST00000570902 ATXN2Q99700 1313 aaKnown RBP20.18■□□□□ 0.82
SCARF1-204ENST00000570902 ZBTB24O43167 697 aaPredicted RBP20.17■□□□□ 0.82
SCARF1-204ENST00000570902 HOXC11O43248 304 aaPredicted RBP20.17■□□□□ 0.82
SCARF1-204ENST00000570902 SERPINF2P08697 491 aa20.17■□□□□ 0.82
SCARF1-204ENST00000570902 DLATP10515 647 aaKnown RBP20.17■□□□□ 0.82
SCARF1-204ENST00000570902 CACNA2D1P54289 1103 aa20.17■□□□□ 0.82
SCARF1-204ENST00000570902 SIM1P81133 766 aaPredicted RBP20.17■□□□□ 0.82
SCARF1-204ENST00000570902 COL9A2Q14055 689 aaPredicted RBP20.17■□□□□ 0.82
SCARF1-204ENST00000570902 SNRNP35Q16560 246 aaKnown RBP20.17■□□□□ 0.82
SCARF1-204ENST00000570902 HECTD3Q5T447 861 aa20.17■□□□□ 0.82
SCARF1-204ENST00000570902 ETFBKMTQ8IXQ9 262 aa20.17■□□□□ 0.82
SCARF1-204ENST00000570902 ZNF513Q8N8E2 541 aaPredicted RBP20.17■□□□□ 0.82
SCARF1-204ENST00000570902 B3GALNT2Q8NCR0 500 aa20.17■□□□□ 0.82
SCARF1-204ENST00000570902 FBXO32Q969P5 355 aa20.17■□□□□ 0.82
SCARF1-204ENST00000570902 PANK2Q9BZ23 570 aa20.17■□□□□ 0.82
SCARF1-204ENST00000570902 ZNF518BQ9C0D4 1074 aa20.17■□□□□ 0.82
SCARF1-204ENST00000570902 DPEP3Q9H4B8 488 aa20.17■□□□□ 0.82
SCARF1-204ENST00000570902 ZDHHC4Q9NPG8 344 aa20.17■□□□□ 0.82
SCARF1-204ENST00000570902 NME7Q9Y5B8 376 aa20.17■□□□□ 0.82
SCARF1-204ENST00000570902 MORC2Q9Y6X9 1032 aaPredicted RBP20.17■□□□□ 0.82
SCARF1-204ENST00000570902 ATP8B3O60423 1300 aa20.17■□□□□ 0.82
SCARF1-204ENST00000570902 SPAARA0A1B0GVQ0 90 aa20.16■□□□□ 0.82
SCARF1-204ENST00000570902 A8MXQ7 604 aa20.16■□□□□ 0.82
SCARF1-204ENST00000570902 EIF3DO15371 548 aaKnown RBP eCLIP20.16■□□□□ 0.82
SCARF1-204ENST00000570902 COCHO43405 550 aa20.16■□□□□ 0.82
SCARF1-204ENST00000570902 OPHN1O60890 802 aa20.16■□□□□ 0.82
SCARF1-204ENST00000570902 TULP3O75386 442 aa20.16■□□□□ 0.82
SCARF1-204ENST00000570902 CST3P01034 146 aaPredicted RBP20.16■□□□□ 0.82
SCARF1-204ENST00000570902 TUBP50607 506 aa20.16■□□□□ 0.82
SCARF1-204ENST00000570902 HNRNPDQ14103 355 aaKnown RBP20.16■□□□□ 0.82
SCARF1-204ENST00000570902 SNX30Q5VWJ9 437 aa20.16■□□□□ 0.82
SCARF1-204ENST00000570902 ZFRQ96KR1 1074 aaKnown RBP20.16■□□□□ 0.82
SCARF1-204ENST00000570902 CGRRF1Q99675 332 aa20.16■□□□□ 0.82
SCARF1-204ENST00000570902 GTPBP2Q9BX10 602 aaKnown RBP20.16■□□□□ 0.82
SCARF1-204ENST00000570902 B3GNT5Q9BYG0 378 aa20.16■□□□□ 0.82
SCARF1-204ENST00000570902 TNMDQ9H2S6 317 aa20.16■□□□□ 0.82
SCARF1-204ENST00000570902 TMEM30AQ9NV96 361 aa20.16■□□□□ 0.82
SCARF1-204ENST00000570902 ASCC3Q8N3C0 2202 aaKnown RBP20.16■□□□□ 0.82
SCARF1-204ENST00000570902 A0A087X0B3 334 aa20.15■□□□□ 0.82
SCARF1-204ENST00000570902 STAU1O95793 577 aaKnown RBP20.15■□□□□ 0.82
SCARF1-204ENST00000570902 HOXB2P14652 356 aa20.15■□□□□ 0.82
SCARF1-204ENST00000570902 CEBPZQ03701 1054 aaKnown RBP20.15■□□□□ 0.82
SCARF1-204ENST00000570902 TRPC3Q13507 836 aa20.15■□□□□ 0.82
SCARF1-204ENST00000570902 PSMD6Q15008 389 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms