RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 MICALL1Q8N3F8 863 aa24.68■■□□□ 1.54
RAB40C-212ENST00000569575 CPA5Q8WXQ8 436 aa24.68■■□□□ 1.54
RAB40C-212ENST00000569575 CPXM1Q96SM3 734 aa24.68■■□□□ 1.54
RAB40C-212ENST00000569575 EIF3CQ99613 913 aaKnown RBP24.68■■□□□ 1.54
RAB40C-212ENST00000569575 PIDD1Q9HB75 910 aa24.68■■□□□ 1.54
RAB40C-212ENST00000569575 ASAH2Q9NR71 780 aa24.68■■□□□ 1.54
RAB40C-212ENST00000569575 ADAM22Q9P0K1 906 aa24.68■■□□□ 1.54
RAB40C-212ENST00000569575 CYTH4Q9UIA0 394 aa24.68■■□□□ 1.54
RAB40C-212ENST00000569575 NENFQ9UMX5 172 aa24.68■■□□□ 1.54
RAB40C-212ENST00000569575 COG5Q9UP83 839 aa24.68■■□□□ 1.54
RAB40C-212ENST00000569575 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.67■■□□□ 1.54
RAB40C-212ENST00000569575 RFPL2O75678 378 aa24.67■■□□□ 1.54
RAB40C-212ENST00000569575 SOAT2O75908 522 aa24.67■■□□□ 1.54
RAB40C-212ENST00000569575 FTLP02792 175 aaPredicted RBP24.67■■□□□ 1.54
RAB40C-212ENST00000569575 KRT83P78385 493 aa24.67■■□□□ 1.54
RAB40C-212ENST00000569575 EFHC1Q5JVL4 640 aa24.67■■□□□ 1.54
RAB40C-212ENST00000569575 ATAT1Q5SQI0 421 aa24.67■■□□□ 1.54
RAB40C-212ENST00000569575 CCDC122Q5T0U0 273 aa24.67■■□□□ 1.54
RAB40C-212ENST00000569575 SNX30Q5VWJ9 437 aa24.67■■□□□ 1.54
RAB40C-212ENST00000569575 TMEM139Q8IV31 216 aa24.67■■□□□ 1.54
RAB40C-212ENST00000569575 GIPC2Q8TF65 315 aa24.67■■□□□ 1.54
RAB40C-212ENST00000569575 SMG7Q92540 1137 aaKnown RBP24.67■■□□□ 1.54
RAB40C-212ENST00000569575 GOLGA1Q92805 767 aa24.67■■□□□ 1.54
RAB40C-212ENST00000569575 ZNF707Q96C28 371 aaPredicted RBP24.67■■□□□ 1.54
RAB40C-212ENST00000569575 RIPOR3Q96MK2 946 aa24.67■■□□□ 1.54
RAB40C-212ENST00000569575 CDK5RAP1Q96SZ6 601 aaKnown RBP24.67■■□□□ 1.54
RAB40C-212ENST00000569575 TLR8Q9NR97 1041 aaKnown RBP24.67■■□□□ 1.54
RAB40C-212ENST00000569575 CLEC1BQ9P126 229 aa24.67■■□□□ 1.54
RAB40C-212ENST00000569575 ANKRD62A6NC57 917 aa24.66■■□□□ 1.54
RAB40C-212ENST00000569575 TULP2O00295 520 aa24.66■■□□□ 1.54
RAB40C-212ENST00000569575 NDUFA10O95299 355 aa24.66■■□□□ 1.54
RAB40C-212ENST00000569575 SSTR3P32745 418 aaPredicted RBP24.66■■□□□ 1.54
RAB40C-212ENST00000569575 GPR15P49685 360 aa24.66■■□□□ 1.54
RAB40C-212ENST00000569575 MRPS5P82675 430 aaKnown RBP24.66■■□□□ 1.54
RAB40C-212ENST00000569575 ADIGQ0VDE8 80 aa24.66■■□□□ 1.54
RAB40C-212ENST00000569575 PTPN20Q4JDL3 420 aa24.66■■□□□ 1.54
RAB40C-212ENST00000569575 SYCE2Q6PIF2 218 aa24.66■■□□□ 1.54
RAB40C-212ENST00000569575 MON1BQ7L1V2 547 aa24.66■■□□□ 1.54
RAB40C-212ENST00000569575 MCOLN2Q8IZK6 566 aa24.66■■□□□ 1.54
RAB40C-212ENST00000569575 MSLNLQ96KJ4 702 aa24.66■■□□□ 1.54
RAB40C-212ENST00000569575 NECTIN4Q96NY8 510 aa24.66■■□□□ 1.54
RAB40C-212ENST00000569575 GCNAQ96QF7 691 aa24.66■■□□□ 1.54
RAB40C-212ENST00000569575 CLIC5Q9NZA1 410 aa24.66■■□□□ 1.54
RAB40C-212ENST00000569575 E5RJQ4 531 aa24.65■■□□□ 1.54
RAB40C-212ENST00000569575 CCL16O15467 120 aa24.65■■□□□ 1.54
RAB40C-212ENST00000569575 LINC01565O15544 149 aa24.65■■□□□ 1.54
RAB40C-212ENST00000569575 DDX6P26196 483 aaKnown RBP eCLIP24.65■■□□□ 1.54
RAB40C-212ENST00000569575 MTHFRP42898 656 aa24.65■■□□□ 1.54
RAB40C-212ENST00000569575 RGS7P49802 495 aa24.65■■□□□ 1.54
RAB40C-212ENST00000569575 TUBP50607 506 aa24.65■■□□□ 1.54
RAB40C-212ENST00000569575 GFPT1Q06210 699 aaPredicted RBP24.65■■□□□ 1.54
RAB40C-212ENST00000569575 TADA2BQ86TJ2 420 aa24.65■■□□□ 1.54
RAB40C-212ENST00000569575 GPIHBP1Q8IV16 184 aa24.65■■□□□ 1.54
RAB40C-212ENST00000569575 STKLD1Q8NE28 680 aa24.65■■□□□ 1.54
RAB40C-212ENST00000569575 FBXO32Q969P5 355 aa24.65■■□□□ 1.54
RAB40C-212ENST00000569575 LRRC3Q9BY71 257 aa24.65■■□□□ 1.54
RAB40C-212ENST00000569575 S1PR5Q9H228 398 aa24.65■■□□□ 1.54
RAB40C-212ENST00000569575 TRPM5Q9NZQ8 1165 aa24.65■■□□□ 1.54
RAB40C-212ENST00000569575 ZNF638Q14966 1978 aaKnown RBP24.65■■□□□ 1.54
RAB40C-212ENST00000569575 ZDHHC11BP0C7U3 371 aa24.64■■□□□ 1.54
RAB40C-212ENST00000569575 LCP1P13796 627 aa24.64■■□□□ 1.54
RAB40C-212ENST00000569575 LTBRP36941 435 aa24.64■■□□□ 1.54
RAB40C-212ENST00000569575 DAOAP59103 153 aa24.64■■□□□ 1.54
RAB40C-212ENST00000569575 SLC6A3Q01959 620 aa24.64■■□□□ 1.54
RAB40C-212ENST00000569575 PTP4A2Q12974 167 aa24.64■■□□□ 1.54
RAB40C-212ENST00000569575 SDHAF4Q5VUM1 108 aa24.64■■□□□ 1.54
RAB40C-212ENST00000569575 PDZD4Q76G19 769 aaPredicted RBP24.64■■□□□ 1.54
RAB40C-212ENST00000569575 GPRIN1Q7Z2K8 1008 aa24.64■■□□□ 1.54
RAB40C-212ENST00000569575 SCUBE3Q8IX30 993 aa24.64■■□□□ 1.54
RAB40C-212ENST00000569575 SCAMP5Q8TAC9 235 aa24.64■■□□□ 1.54
RAB40C-212ENST00000569575 MCRS1Q96EZ8 462 aa24.64■■□□□ 1.54
RAB40C-212ENST00000569575 CALR3Q96L12 384 aaKnown RBP24.64■■□□□ 1.54
RAB40C-212ENST00000569575 ULBP1Q9BZM6 244 aa24.64■■□□□ 1.54
RAB40C-212ENST00000569575 MRPL47Q9HD33 250 aaKnown RBP24.64■■□□□ 1.54
RAB40C-212ENST00000569575 MAGED2Q9UNF1 606 aaPredicted RBP24.64■■□□□ 1.54
RAB40C-212ENST00000569575 PAPSS1O43252 624 aaPredicted RBP24.63■■□□□ 1.53
RAB40C-212ENST00000569575 TBX10O75333 385 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 H2AFZP0C0S5 128 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 CDR1P51861 262 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 TAF10Q12962 218 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 PUS10Q3MIT2 529 aaKnown RBP24.63■■□□□ 1.53
RAB40C-212ENST00000569575 RARS2Q5T160 578 aaKnown RBP24.63■■□□□ 1.53
RAB40C-212ENST00000569575 TMC5Q6UXY8 1006 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 MMS22LQ6ZRQ5 1243 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 H2AFVQ71UI9 128 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 SLC26A9Q7LBE3 791 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 TMC8Q8IU68 726 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 SMRP1Q8NCR6 262 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 C3orf20Q8ND61 904 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 GPR152Q8TDT2 470 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 HLA-CQ95604 372 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 CORO1BQ9BR76 489 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 WDR6Q9NNW5 1121 aaKnown RBP24.63■■□□□ 1.53
RAB40C-212ENST00000569575 ABCC13Q9NSE7 274 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 PARVAQ9NVD7 372 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 DNMT3BQ9UBC3 853 aaKnown RBP24.63■■□□□ 1.53
RAB40C-212ENST00000569575 LCMT1Q9UIC8 334 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 CD207Q9UJ71 328 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 SCINQ9Y6U3 715 aa24.63■■□□□ 1.53
RAB40C-212ENST00000569575 SOWAHDA6NJG2 315 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms