RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 SCML2Q9UQR0 700 aa14.59□□□□□ -0.07
HERPUD1-218ENST00000569569 MRPS17Q9Y2R5 130 aaKnown RBP14.59□□□□□ -0.07
HERPUD1-218ENST00000569569 FAM170BA6NMN3 283 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 RNF225M0QZC1 329 aaPredicted RBP14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 NCAM2O15394 837 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 PRKCSHP14314 528 aaPredicted RBP14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 SLC9A1P19634 815 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 CD72P21854 359 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 TUBP50607 506 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 KPNA1P52294 538 aaPredicted RBP14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 KIF11P52732 1056 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 MTF1Q14872 753 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 UBXN2BQ14CS0 331 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 ZNF77Q15935 545 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 EXOC3L4Q17RC7 722 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 C1orf228Q6PIY5 440 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 TRIM65Q6PJ69 517 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 ENOSF1Q7L5Y1 443 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 GPRIN1Q7Z2K8 1008 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 KREMEN1Q96MU8 473 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 TUBGCP2Q9BSJ2 902 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 NDST4Q9H3R1 872 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 UBE2TQ9NPD8 197 aaPredicted RBP14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 SAMSN1Q9NSI8 373 aaKnown RBP14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 GTSE1Q9NYZ3 720 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 GMIPQ9P107 970 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 HESX1Q9UBX0 185 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 TSPAN16Q9UKR8 245 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 NFE2L3Q9Y4A8 694 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 PIAS3Q9Y6X2 628 aa14.58□□□□□ -0.08
HERPUD1-218ENST00000569569 SHISA7A6NL88 538 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 KCNJ18B7U540 433 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 GALR2O43603 387 aaPredicted RBP14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 DCNP07585 359 aaKnown RBP14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 MBL2P11226 248 aaPredicted RBP14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 EEF1GP26641 437 aaKnown RBP14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 BCAT1P54687 386 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 MFAP3P55082 362 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 ZXDBP98169 803 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 USP4Q13107 963 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 RUNX3Q13761 415 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 KCNJ12Q14500 433 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 PDGFRLQ15198 375 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 STILQ15468 1287 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 CNGA2Q16280 664 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 STX1AQ16623 288 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 GOLGA7BQ2TAP0 167 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 ITPRIPL2Q3MIP1 535 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 VWA3BQ502W6 1294 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 HSP90AA4PQ58FG1 418 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 TTC30AQ86WT1 665 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 KIAA1958Q8N8K9 716 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 RIN3Q8TB24 985 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 SH3RF2Q8TEC5 729 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 OSCP1Q8WVF1 389 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 FAM3CQ92520 227 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 TMEM63CQ9P1W3 806 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 CNTN6Q9UQ52 1028 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 MTF2Q9Y483 593 aaPredicted RBP14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 CPQQ9Y646 472 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 USP3Q9Y6I4 520 aa14.57□□□□□ -0.08
HERPUD1-218ENST00000569569 CACNA1HO95180 2353 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 LEFTY2O00292 366 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 O00370 1275 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 XPO1O14980 1071 aaKnown RBP14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 COCHO43405 550 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 TARSP26639 723 aaKnown RBP14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 PON1P27169 355 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 PSEN1P49768 467 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 TNK2Q07912 1038 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 PDE4CQ08493 712 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 BST2Q10589 180 aaKnown RBP14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 TCP11X2Q5H9J9 407 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 RAB41Q5JT25 222 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 MIIPQ5JXC2 388 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 TRIM68Q6AZZ1 485 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 LCLAT1Q6UWP7 414 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 CCDC186Q7Z3E2 898 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 PIGZQ86VD9 579 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 RALGPS2Q86X27 583 aaPredicted RBP14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 DDX42Q86XP3 938 aaKnown RBP eCLIP14.56□□□□□ -0.082e-8■■■■■ 39.1
HERPUD1-218ENST00000569569 CCDC105Q8IYK2 499 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 DTWD2Q8NBA8 298 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 RBBP8NLQ8NC74 664 aaPredicted RBP14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 TTC16Q8NEE8 873 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 PRSS33Q8NF86 280 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 TTC8Q8TAM2 541 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 TFAP2BQ92481 460 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 EBF3Q9H4W6 596 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 CCSER2Q9H7U1 834 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 HPS4Q9NQG7 708 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 DUS2Q9NX74 493 aaKnown RBP14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 DLGAP2Q9P1A6 1054 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 APEX2Q9UBZ4 518 aa14.56□□□□□ -0.08
HERPUD1-218ENST00000569569 SPECC1L-ADORA2AF8WAN1 911 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 CYP26A1O43174 497 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 TLR5O60602 858 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 CTHP32929 405 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 MAGEA9P43362 315 aa14.55□□□□□ -0.08
HERPUD1-218ENST00000569569 SOX9P48436 509 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms