RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 PFKMP08237 780 aa8.22□□□□□ -1.09
LINC00559-201ENST00000569476 KRT15P19012 456 aa8.22□□□□□ -1.09
LINC00559-201ENST00000569476 RPL22P35268 128 aaKnown RBP8.22□□□□□ -1.09
LINC00559-201ENST00000569476 HCAR3P49019 387 aa8.22□□□□□ -1.09
LINC00559-201ENST00000569476 BNIPLQ7Z465 357 aa8.22□□□□□ -1.09
LINC00559-201ENST00000569476 JOSD2Q8TAC2 188 aa8.22□□□□□ -1.09
LINC00559-201ENST00000569476 QKIQ96PU8 341 aaKnown RBP eCLIP8.22□□□□□ -1.09
LINC00559-201ENST00000569476 TRABDQ9H4I3 376 aa8.22□□□□□ -1.09
LINC00559-201ENST00000569476 TSPAN16Q9UKR8 245 aa8.22□□□□□ -1.09
LINC00559-201ENST00000569476 CITO14578 2027 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 CCL15-CCL14A0A0B4J2E2 113 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 SCTRP47872 440 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 SLC8A3P57103 927 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 SLC18A2Q05940 514 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 ZNF33AQ06730 810 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 CCL15Q16663 113 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 C9orf57Q5W0N0 161 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 SCARA5Q6ZMJ2 495 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 FAM183BPQ6ZVS7 135 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 TRMT1LQ7Z2T5 733 aaKnown RBP8.21□□□□□ -1.09
LINC00559-201ENST00000569476 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.21□□□□□ -1.09
LINC00559-201ENST00000569476 PYROXD1Q8WU10 500 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 SOCS4Q8WXH5 440 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 NAT9Q9BTE0 207 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 LRRC4CQ9HCJ2 640 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 TXLNGQ9NUQ3 528 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 RABGEF1Q9UJ41 708 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 FZD1Q9UP38 647 aa8.21□□□□□ -1.09
LINC00559-201ENST00000569476 GNEQ9Y223 722 aaKnown RBP8.21□□□□□ -1.09
LINC00559-201ENST00000569476 C9IYK1 514 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 RASA4BC9J798 803 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 BTBD19C9JJ37 291 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 RASA4O43374 803 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 SMPD1P17405 629 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 GCAP28676 217 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 ALDH3A1P30838 453 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 SLC8A1P32418 973 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 TAF6P49848 677 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 GJA9P57773 515 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 PRKG1Q13976 671 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 KRT81Q14533 505 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 RNF187Q5TA31 235 aaPredicted RBP8.21□□□□□ -1.1
LINC00559-201ENST00000569476 TAF2Q6P1X5 1199 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 TIFABQ6ZNK6 161 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 CYP4V2Q6ZWL3 525 aaPredicted RBP8.21□□□□□ -1.1
LINC00559-201ENST00000569476 PDZD4Q76G19 769 aaPredicted RBP8.21□□□□□ -1.1
LINC00559-201ENST00000569476 RXFP2Q8WXD0 754 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 STON2Q8WXE9 905 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 COPS5Q92905 334 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 C18orf25Q96B23 403 aaPredicted RBP8.21□□□□□ -1.1
LINC00559-201ENST00000569476 HNRNPABQ99729 332 aaKnown RBP8.21□□□□□ -1.1
LINC00559-201ENST00000569476 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.21□□□□□ -1.1
LINC00559-201ENST00000569476 PDGFCQ9NRA1 345 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 KLHL14Q9P2G3 628 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 CAPN7Q9Y6W3 813 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 TYROBPO43914 113 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 IQCF3P0C7M6 154 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 PDGFRAP16234 1089 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 IL1R2P27930 398 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 CCNFP41002 786 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 MAGEA3P43357 314 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 PDIA2Q13087 525 aaKnown RBP8.21□□□□□ -1.1
LINC00559-201ENST00000569476 MAP2K5Q13163 448 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 QPCTQ16769 361 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 ZFYVE27Q5T4F4 411 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 CYP4A22Q5TCH4 519 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 TTC19Q6DKK2 380 aaPredicted RBP8.21□□□□□ -1.1
LINC00559-201ENST00000569476 OR6B2Q6IFH4 312 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 IRGQQ8WZA9 623 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 NTAN1Q96AB6 310 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 TMEM237Q96Q45 408 aa8.21□□□□□ -1.1
LINC00559-201ENST00000569476 FHDC1Q9C0D6 1143 aaPredicted RBP8.21□□□□□ -1.1
LINC00559-201ENST00000569476 H0YHG0 523 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 GOLGA8SH3BPF8 625 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 MTSS1O43312 755 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 VIMP08670 466 aaKnown RBP8.2□□□□□ -1.1
LINC00559-201ENST00000569476 CCNB1P14635 433 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 DNAJB1P25685 340 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 CCDC14Q49A88 953 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 SPRYD7Q5W111 196 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 DPP9Q86TI2 863 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 ACMSDQ8TDX5 336 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 INPP5DQ92835 1189 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 UPF1Q92900 1129 aaKnown RBP eCLIP8.2□□□□□ -1.1
LINC00559-201ENST00000569476 RAB3IPQ96QF0 476 aaPredicted RBP8.2□□□□□ -1.1
LINC00559-201ENST00000569476 TGS1Q96RS0 853 aaKnown RBP8.2□□□□□ -1.1
LINC00559-201ENST00000569476 PCDH18Q9HCL0 1135 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 SAR1AQ9NR31 198 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 PTCH2Q9Y6C5 1203 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 USH1CQ9Y6N9 552 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 NCAM2O15394 837 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 PSMD3O43242 534 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 NPTXRO95502 500 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 CALCAP01258 141 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 SMIM10L2AP0DMW4 78 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 SMIM10L2BP0DMW5 78 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 KRT10P13645 584 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 PRKCHP24723 683 aa8.2□□□□□ -1.1
LINC00559-201ENST00000569476 HOXA11P31270 313 aaPredicted RBP8.2□□□□□ -1.1
LINC00559-201ENST00000569476 MSH2P43246 934 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms