RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 CCDC33Q8N5R6 958 aa14.5□□□□□ -0.09
CNOT1-215ENST00000569020 PARD3BQ8TEW8 1205 aa14.5□□□□□ -0.09
CNOT1-215ENST00000569020 OTUB2Q96DC9 234 aa14.5□□□□□ -0.09
CNOT1-215ENST00000569020 SMARCD1Q96GM5 515 aa14.5□□□□□ -0.09
CNOT1-215ENST00000569020 CNOT6LQ96LI5 555 aaKnown RBP14.5□□□□□ -0.09
CNOT1-215ENST00000569020 SMYD3Q9H7B4 428 aa14.5□□□□□ -0.09
CNOT1-215ENST00000569020 DMAP1Q9NPF5 467 aaPredicted RBP14.5□□□□□ -0.09
CNOT1-215ENST00000569020 EXOC1Q9NV70 894 aa14.5□□□□□ -0.09
CNOT1-215ENST00000569020 SERTAD1Q9UHV2 236 aa14.5□□□□□ -0.09
CNOT1-215ENST00000569020 SH3BP1Q9Y3L3 701 aa14.5□□□□□ -0.09
CNOT1-215ENST00000569020 CEP192Q8TEP8 1941 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 E2F8A0AVK6 867 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 BCLAF3A2AJT9 711 aaKnown RBP14.49□□□□□ -0.09
CNOT1-215ENST00000569020 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.49□□□□□ -0.09
CNOT1-215ENST00000569020 HAX1O00165 279 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 SCAMP3O14828 347 aaKnown RBP14.49□□□□□ -0.09
CNOT1-215ENST00000569020 ALDH1A2O94788 518 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 KAT7O95251 611 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 C4BPAP04003 597 aaKnown RBP14.49□□□□□ -0.09
CNOT1-215ENST00000569020 ADH5P11766 374 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 P4HA1P13674 534 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 SLC6A11P48066 632 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 SLC5A3P53794 718 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 CLDN10P78369 228 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 GAD2Q05329 585 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 HSF5Q4G112 596 aaPredicted RBP14.49□□□□□ -0.09
CNOT1-215ENST00000569020 HECTD3Q5T447 861 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 PMS2CLQ68D20 193 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 RNF43Q68DV7 783 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 RHBDF2Q6PJF5 856 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 SCARA5Q6ZMJ2 495 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 TTC30AQ86WT1 665 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 PIP4P2Q8N4L2 257 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 PLEKHO2Q8TD55 490 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 POLMQ9NP87 494 aaPredicted RBP14.49□□□□□ -0.09
CNOT1-215ENST00000569020 COMMD8Q9NX08 183 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 CHORDC1Q9UHD1 332 aaPredicted RBP14.49□□□□□ -0.09
CNOT1-215ENST00000569020 INVSQ9Y283 1065 aa14.49□□□□□ -0.09
CNOT1-215ENST00000569020 TM4SF5O14894 197 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 COCHO43405 550 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 KLRC4O43908 158 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 AP1G2O75843 785 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 SLFN14P0C7P3 912 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 TRIM21P19474 475 aaKnown RBP14.48□□□□□ -0.09
CNOT1-215ENST00000569020 TIE1P35590 1138 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 TUBP50607 506 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 STK4Q13043 487 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 SGSM1Q2NKQ1 1148 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 KMT5BQ4FZB7 885 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 PREPLQ4J6C6 727 aaPredicted RBP14.48□□□□□ -0.09
CNOT1-215ENST00000569020 EOGTQ5NDL2 527 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 SNX30Q5VWJ9 437 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 BTBD8Q5XKL5 378 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 TCEAL6Q6IPX3 200 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 SLC9A9Q8IVB4 645 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 GRAMD1CQ8IYS0 662 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 KIAA0895Q8NCT3 520 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 MDGA1Q8NFP4 955 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 TMEM174Q8WUU8 243 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 TCEAL3Q969E4 200 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 CHAMP1Q96JM3 812 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 EDEM2Q9BV94 578 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 NACA2Q9H009 215 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 ARHGEF4Q9NR80 690 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 PLXND1Q9Y4D7 1925 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 ABCA7Q8IZY2 2146 aa14.48□□□□□ -0.09
CNOT1-215ENST00000569020 TNRC6BQ9UPQ9 1833 aaKnown RBP14.48□□□□□ -0.09
CNOT1-215ENST00000569020 A0A0A0MRY4 1105 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 ANTXRLA6NF34 631 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 PDXKO00764 312 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 TNFRSF10BO14763 440 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 VNN1O95497 513 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 KLF8O95600 359 aaPredicted RBP14.47□□□□□ -0.09
CNOT1-215ENST00000569020 RPN1P04843 607 aaKnown RBP14.47□□□□□ -0.09
CNOT1-215ENST00000569020 GRIA2P42262 883 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 DLG4P78352 724 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 DNM1Q05193 864 aaKnown RBP14.47□□□□□ -0.09
CNOT1-215ENST00000569020 KDSRQ06136 332 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 LY6G5CQ5SRR4 150 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 NUDT18Q6ZVK8 323 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 PAQR9Q6ZVX9 377 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 ACOT1Q86TX2 421 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 C12orf40Q86WS4 652 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 ALLCQ8N6M5 410 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 IL17RCQ8NAC3 791 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 TXNDC5Q8NBS9 432 aaKnown RBP14.47□□□□□ -0.09
CNOT1-215ENST00000569020 SCAMP5Q8TAC9 235 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 TAF4BQ92750 862 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 PAGE5Q96GU1 130 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 LSM14BQ9BX40 385 aaKnown RBP14.47□□□□□ -0.09
CNOT1-215ENST00000569020 SDCBP2Q9H190 292 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 FBXO44Q9H4M3 255 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 CCSER2Q9H7U1 834 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 KRT82Q9NSB4 513 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 DMAC2Q9NW81 257 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 IL37Q9NZH6 218 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 RCOR1Q9UKL0 485 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 FRMD4BQ9Y2L6 1034 aa14.47□□□□□ -0.09
CNOT1-215ENST00000569020 FAM92AA1XBS5 289 aa14.46□□□□□ -0.09
CNOT1-215ENST00000569020 KHNYNO15037 678 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms