RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 PCDHB9Q9Y5E1 797 aa13.31□□□□□ -0.28
SNX29-207ENST00000568949 IGHV1OR15-9A0A0B4J2B8 117 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 E2F8A0AVK6 867 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 TBC1D3BA6NDS4 549 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 ZBTB24O43167 697 aaPredicted RBP13.3□□□□□ -0.28
SNX29-207ENST00000568949 HOXC11O43248 304 aaPredicted RBP13.3□□□□□ -0.28
SNX29-207ENST00000568949 LMO2P25791 158 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 PSMC1P62191 440 aaKnown RBP13.3□□□□□ -0.28
SNX29-207ENST00000568949 MYO1EQ12965 1108 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 LY6G5CQ5SRR4 150 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 BTBD8Q5XKL5 378 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 SCARA3Q6AZY7 606 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 NUDT18Q6ZVK8 323 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 GLRX5Q86SX6 157 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 SLC41A1Q8IVJ1 513 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 ETFBKMTQ8IXQ9 262 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 DEFB119Q8N690 84 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 ZNF513Q8N8E2 541 aaPredicted RBP13.3□□□□□ -0.28
SNX29-207ENST00000568949 OR2I1PQ8NGU4 316 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 KBTBD7Q8WVZ9 684 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 LARP4BQ92615 738 aaKnown RBP13.3□□□□□ -0.28
SNX29-207ENST00000568949 CAMK1GQ96NX5 476 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 DUSP9Q99956 384 aaKnown RBP13.3□□□□□ -0.28
SNX29-207ENST00000568949 DEC1Q9P2X7 70 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 SEL1LQ9UBV2 794 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 SUSD2Q9UGT4 822 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 APOBEC2Q9Y235 224 aaKnown RBP13.3□□□□□ -0.28
SNX29-207ENST00000568949 STARD13Q9Y3M8 1113 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 NBEAQ8NFP9 2946 aa13.3□□□□□ -0.28
SNX29-207ENST00000568949 TULP1O00294 542 aaPredicted RBP13.29□□□□□ -0.28
SNX29-207ENST00000568949 SCAMP3O14828 347 aaKnown RBP13.29□□□□□ -0.28
SNX29-207ENST00000568949 TULP3O75386 442 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 ABL1P00519 1130 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 TMEM191BP0C7N4 346 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 MBL2P11226 248 aaPredicted RBP13.29□□□□□ -0.28
SNX29-207ENST00000568949 HOXB2P14652 356 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 GARTP22102 1010 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 WARSP23381 471 aaKnown RBP13.29□□□□□ -0.28
SNX29-207ENST00000568949 NTSR1P30989 418 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 DDIT3P35638 169 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 LONP1P36776 959 aaKnown RBP13.29□□□□□ -0.28
SNX29-207ENST00000568949 CYP27A1Q02318 531 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 TAF10Q12962 218 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 PLEKHG6Q3KR16 790 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 TDRD10Q5VZ19 366 aaKnown RBP13.29□□□□□ -0.28
SNX29-207ENST00000568949 SFR1Q86XK3 245 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 NAXDQ8IW45 347 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 TRIML1Q8N9V2 468 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 RASSF8Q8NHQ8 419 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 MYCBPAPQ8TBZ2 947 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 SAAL1Q96ER3 474 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 PCED1BQ96HM7 432 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 ZNF419Q96HQ0 510 aaPredicted RBP13.29□□□□□ -0.28
SNX29-207ENST00000568949 SLITRK1Q96PX8 696 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 ACCSQ96QU6 501 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 ZDHHC5Q9C0B5 715 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 MTMR12Q9C0I1 747 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 SCUBE2Q9NQ36 999 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 R3HCC1Q9Y3T6 440 aaKnown RBP13.29□□□□□ -0.28
SNX29-207ENST00000568949 GCN1Q92616 2671 aaKnown RBP13.29□□□□□ -0.28
SNX29-207ENST00000568949 WDFY3Q8IZQ1 3526 aa13.29□□□□□ -0.28
SNX29-207ENST00000568949 A0A1W2PQF6 199 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 F8VP50 259 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 GNSP15586 552 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 KCNA1Q09470 495 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 SYCP2LQ5T4T6 812 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 L1TD1Q5T7N2 865 aaKnown RBP13.28□□□□□ -0.28
SNX29-207ENST00000568949 PNPLA1Q8N8W4 532 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 TERB1Q8NA31 727 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 ZSWIM2Q8NEG5 633 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 HPDLQ96IR7 371 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 ANKRD36BP1Q96IX9 119 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 HSPA12BQ96MM6 686 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 MRPL44Q9H9J2 332 aaKnown RBP13.28□□□□□ -0.28
SNX29-207ENST00000568949 PDE11AQ9HCR9 933 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 CD248Q9HCU0 757 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 KIAA1522Q9P206 1035 aaPredicted RBP13.28□□□□□ -0.28
SNX29-207ENST00000568949 DKK4Q9UBT3 224 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 HCN2Q9UL51 889 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 PTPRBP23467 1997 aa13.28□□□□□ -0.28
SNX29-207ENST00000568949 BMP15O95972 392 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 PDGFRBP09619 1106 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 FAM163BP0C2L3 166 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 GAP43P17677 238 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 NDUFV2P19404 249 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 ALCAMQ13740 583 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 C10orf76Q5T2E6 689 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 SDE2Q6IQ49 451 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 TOGARAM2Q6ZUX3 1019 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 RGL4Q8IZJ4 473 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 NAT16Q8N8M0 369 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 PDZD8Q8NEN9 1154 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 IPO4Q8TEX9 1081 aaKnown RBP13.27□□□□□ -0.29
SNX29-207ENST00000568949 OVCA2Q8WZ82 227 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 FOXJ1Q92949 421 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 COL26A1Q96A83 441 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 FAM84AQ96KN4 292 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 ZFRQ96KR1 1074 aaKnown RBP13.27□□□□□ -0.29
SNX29-207ENST00000568949 INTS13Q9NVM9 706 aa13.27□□□□□ -0.29
SNX29-207ENST00000568949 FLNBO75369 2602 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms