RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 NT5C1BQ96P26 610 aa10.96□□□□□ -0.65
UBR1-207ENST00000568782 SLC22A12Q96S37 553 aa10.96□□□□□ -0.65
UBR1-207ENST00000568782 CDK5RAP1Q96SZ6 601 aaKnown RBP10.96□□□□□ -0.65
UBR1-207ENST00000568782 PHOX2BQ99453 314 aa10.96□□□□□ -0.65
UBR1-207ENST00000568782 P2RY13Q9BPV8 354 aa10.96□□□□□ -0.65
UBR1-207ENST00000568782 ECT2Q9H8V3 914 aa10.96□□□□□ -0.65
UBR1-207ENST00000568782 APOBEC3GQ9HC16 384 aaKnown RBP10.96□□□□□ -0.65
UBR1-207ENST00000568782 CSNK1G1Q9HCP0 422 aa10.96□□□□□ -0.65
UBR1-207ENST00000568782 CISHQ9NSE2 258 aa10.96□□□□□ -0.65
UBR1-207ENST00000568782 ZSCAN32Q9NX65 697 aa10.96□□□□□ -0.65
UBR1-207ENST00000568782 GCNT4Q9P109 453 aa10.96□□□□□ -0.65
UBR1-207ENST00000568782 KIAA1468Q9P260 1216 aa10.96□□□□□ -0.65
UBR1-207ENST00000568782 DACH1Q9UI36 760 aa10.96□□□□□ -0.65
UBR1-207ENST00000568782 KIAA1257Q9ULG3 409 aa10.96□□□□□ -0.65
UBR1-207ENST00000568782 PCDHGA2Q9Y5H1 932 aa10.96□□□□□ -0.65
UBR1-207ENST00000568782 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.96□□□□□ -0.65
UBR1-207ENST00000568782 CPQQ9Y646 472 aa10.96□□□□□ -0.65
UBR1-207ENST00000568782 COL4A2P08572 1712 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 TRDMT1O14717 391 aaKnown RBP10.95□□□□□ -0.66
UBR1-207ENST00000568782 P4HA2O15460 535 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 ADH1CP00326 375 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 RALAP11233 206 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 CD19P15391 556 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 ATP5C1P36542 298 aaKnown RBP10.95□□□□□ -0.66
UBR1-207ENST00000568782 CACNA2D1P54289 1103 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 STX17P56962 302 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 MCCD1P59942 119 aaPredicted RBP10.95□□□□□ -0.66
UBR1-207ENST00000568782 USP4Q13107 963 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 CUL2Q13617 745 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 CBWD6Q4V339 395 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 SGO2Q562F6 1265 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 CBWD3Q5JTY5 395 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 CBWD5Q5RIA9 395 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 BTBD8Q5XKL5 378 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 PAQR9Q6ZVX9 377 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 ZC3H3Q8IXZ2 948 aaKnown RBP10.95□□□□□ -0.66
UBR1-207ENST00000568782 ARHGAP18Q8N392 663 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 SEMA4DQ92854 862 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 CD101Q93033 1021 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 OTUB2Q96DC9 234 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 GBP4Q96PP9 640 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 SMOQ99835 787 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 SRRTQ9BXP5 876 aaKnown RBP10.95□□□□□ -0.66
UBR1-207ENST00000568782 DUSP16Q9BY84 665 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 RNF38Q9H0F5 515 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 SMPD4Q9NXE4 827 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 CFAP97Q9P2B7 532 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 HMGXB4Q9UGU5 601 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 LSM7Q9UK45 103 aaKnown RBP10.95□□□□□ -0.66
UBR1-207ENST00000568782 COQ4Q9Y3A0 265 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 WNT6Q9Y6F9 365 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 R4GN57 208 aa10.95□□□□□ -0.66
UBR1-207ENST00000568782 E2F8A0AVK6 867 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 PRR23AA6NEV1 266 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 PPP1R3GB7ZBB8 358 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 TNFRSF10BO14763 440 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 TLR5O60602 858 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 OAS1P00973 400 aaKnown RBP10.94□□□□□ -0.66
UBR1-207ENST00000568782 ARSAP15289 507 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 CD44P16070 742 aaKnown RBP10.94□□□□□ -0.66
UBR1-207ENST00000568782 GJA4P35212 333 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 LRMPQ12912 555 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 EML3Q32P44 896 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 PPP1R26Q5T8A7 1209 aaPredicted RBP10.94□□□□□ -0.66
UBR1-207ENST00000568782 SNX30Q5VWJ9 437 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 TTI2Q6NXR4 508 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 CLEC20AQ6ZU45 233 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 PPM1KQ8N3J5 372 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 MLKLQ8NB16 471 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 TATDN2Q93075 761 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 SLC35C1Q96A29 364 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 FAM81BQ96LP2 452 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 LRRC4Q9HBW1 653 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 HPS4Q9NQG7 708 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 GMIPQ9P107 970 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 NAGPAQ9UK23 515 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 SLC8A2Q9UPR5 921 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 SCML2Q9UQR0 700 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 COL4A3Q01955 1670 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 MYOFQ9NZM1 2061 aa10.94□□□□□ -0.66
UBR1-207ENST00000568782 RALGAPA1Q6GYQ0 2036 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.93□□□□□ -0.66
UBR1-207ENST00000568782 PMM2O15305 246 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 COCHO43405 550 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 BEST1O76090 585 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 OLFM2O95897 454 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 AFPP02771 609 aaKnown RBP10.93□□□□□ -0.66
UBR1-207ENST00000568782 VDRP11473 427 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 GALK1P51570 392 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 BCAT1P54687 386 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 KCNH2Q12809 1159 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 FZD5Q13467 585 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 CCINQ13939 588 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 STILQ15468 1287 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 TMEM196Q5HYL7 178 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 C10orf120Q5SQS8 335 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 TXNDC11Q6PKC3 985 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 TMEM270Q6UE05 265 aa10.93□□□□□ -0.66
UBR1-207ENST00000568782 RSRC2Q7L4I2 434 aaKnown RBP10.93□□□□□ -0.66
UBR1-207ENST00000568782 FAM114A1Q8IWE2 563 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms