RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 ELOA2Q8IYF1 753 aaPredicted RBP15.29■□□□□ 0.04
CMTM3-215ENST00000568477 KIAA1958Q8N8K9 716 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 C12orf29Q8N999 325 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 FBXL13Q8NEE6 735 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 ZMIZ2Q8NF64 920 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 RUBCNQ92622 972 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 CHFRQ96EP1 664 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 TWNKQ96RR1 684 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 P2RY13Q9BPV8 354 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 RNF38Q9H0F5 515 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 CSNK1G1Q9HCP0 422 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 SMPD4Q9NXE4 827 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 IL37Q9NZH6 218 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 HELZP42694 1942 aaKnown RBP15.29■□□□□ 0.04
CMTM3-215ENST00000568477 SLC9A3R1O14745 358 aaPredicted RBP15.28■□□□□ 0.04
CMTM3-215ENST00000568477 DRD1P21728 446 aa15.28■□□□□ 0.04
CMTM3-215ENST00000568477 PMS1P54277 932 aaKnown RBP15.28■□□□□ 0.04
CMTM3-215ENST00000568477 ZXDBP98169 803 aa15.28■□□□□ 0.04
CMTM3-215ENST00000568477 HECTD3Q5T447 861 aa15.28■□□□□ 0.04
CMTM3-215ENST00000568477 ZC3H3Q8IXZ2 948 aaKnown RBP15.28■□□□□ 0.04
CMTM3-215ENST00000568477 TTC39CQ8N584 583 aa15.28■□□□□ 0.04
CMTM3-215ENST00000568477 SEMA4DQ92854 862 aa15.28■□□□□ 0.04
CMTM3-215ENST00000568477 CYFIP2Q96F07 1278 aa15.28■□□□□ 0.04
CMTM3-215ENST00000568477 FAXDC2Q96IV6 333 aa15.28■□□□□ 0.04
CMTM3-215ENST00000568477 HNRNPABQ99729 332 aaKnown RBP15.28■□□□□ 0.04
CMTM3-215ENST00000568477 EPC1Q9H2F5 836 aa15.28■□□□□ 0.04
CMTM3-215ENST00000568477 LINC00597Q9H2U6 94 aa15.28■□□□□ 0.04
CMTM3-215ENST00000568477 FBXO44Q9H4M3 255 aa15.28■□□□□ 0.04
CMTM3-215ENST00000568477 RAB20Q9NX57 234 aa15.28■□□□□ 0.04
CMTM3-215ENST00000568477 GMIPQ9P107 970 aa15.28■□□□□ 0.04
CMTM3-215ENST00000568477 CFAP97Q9P2B7 532 aa15.28■□□□□ 0.04
CMTM3-215ENST00000568477 CHORDC1Q9UHD1 332 aaPredicted RBP15.28■□□□□ 0.04
CMTM3-215ENST00000568477 SMG5Q9UPR3 1016 aaKnown RBP15.28■□□□□ 0.04
CMTM3-215ENST00000568477 FAM92AA1XBS5 289 aa15.27■□□□□ 0.04
CMTM3-215ENST00000568477 TRIM49BA6NDI0 452 aa15.27■□□□□ 0.04
CMTM3-215ENST00000568477 BEST1O76090 585 aa15.27■□□□□ 0.04
CMTM3-215ENST00000568477 EGFP01133 1207 aa15.27■□□□□ 0.04
CMTM3-215ENST00000568477 PPP1R2P41236 205 aa15.27■□□□□ 0.04
CMTM3-215ENST00000568477 TUBP50607 506 aa15.27■□□□□ 0.04
CMTM3-215ENST00000568477 GALK1P51570 392 aa15.27■□□□□ 0.04
CMTM3-215ENST00000568477 SKOR2Q2VWA4 1001 aaPredicted RBP15.27■□□□□ 0.04
CMTM3-215ENST00000568477 SNX30Q5VWJ9 437 aa15.27■□□□□ 0.04
CMTM3-215ENST00000568477 NAIF1Q69YI7 327 aaPredicted RBP15.27■□□□□ 0.04
CMTM3-215ENST00000568477 FILIP1Q7Z7B0 1213 aa15.27■□□□□ 0.04
CMTM3-215ENST00000568477 WHAMMQ8TF30 809 aa15.27■□□□□ 0.04
CMTM3-215ENST00000568477 CD101Q93033 1021 aa15.27■□□□□ 0.04
CMTM3-215ENST00000568477 DHTKD1Q96HY7 919 aaPredicted RBP15.27■□□□□ 0.04
CMTM3-215ENST00000568477 FBRSL1Q9HCM7 1045 aaKnown RBP15.27■□□□□ 0.04
CMTM3-215ENST00000568477 NCDNQ9UBB6 729 aa15.27■□□□□ 0.04
CMTM3-215ENST00000568477 ARMCX3Q9UH62 379 aaPredicted RBP15.27■□□□□ 0.04
CMTM3-215ENST00000568477 MAN1B1Q9UKM7 699 aa15.27■□□□□ 0.04
CMTM3-215ENST00000568477 MYH10P35580 1976 aa15.27■□□□□ 0.03
CMTM3-215ENST00000568477 CEP250Q9BV73 2442 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 CHURC1-FNTBB4DL54 471 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 K7ESF4 209 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 COCHO43405 550 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 ATG13O75143 517 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 ZDHHC11BP0C7U3 371 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 FNTBP49356 437 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 FBXO43Q4G163 708 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 ISM2Q6H9L7 571 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 CLEC20AQ6ZU45 233 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 SECISBP2LQ93073 1101 aaKnown RBP15.26■□□□□ 0.03
CMTM3-215ENST00000568477 JAKMIP2Q96AA8 810 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 NACA2Q9H009 215 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 FAM124BQ9H5Z6 455 aaPredicted RBP15.26■□□□□ 0.03
CMTM3-215ENST00000568477 CCSER2Q9H7U1 834 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 PNPLA8Q9NP80 782 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 TLR8Q9NR97 1041 aaKnown RBP15.26■□□□□ 0.03
CMTM3-215ENST00000568477 CISHQ9NSE2 258 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 C2orf42Q9NWW7 574 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 RAB23Q9ULC3 237 aa15.26■□□□□ 0.03
CMTM3-215ENST00000568477 SCAMP3O14828 347 aaKnown RBP15.25■□□□□ 0.03
CMTM3-215ENST00000568477 RNF40O75150 1001 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 GADD45BO75293 160 aaPredicted RBP15.25■□□□□ 0.03
CMTM3-215ENST00000568477 CYP17A1P05093 508 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 HOXA6P31267 233 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 DMWDQ09019 674 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 CBWD6Q4V339 395 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 ZNF394Q53GI3 561 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 CBWD3Q5JTY5 395 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 CBWD5Q5RIA9 395 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 HEATR6Q6AI08 1181 aaKnown RBP15.25■□□□□ 0.03
CMTM3-215ENST00000568477 KLHL10Q6JEL2 608 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 PKN3Q6P5Z2 889 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 GPRIN1Q7Z2K8 1008 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 LONP2Q86WA8 852 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 ZFRQ96KR1 1074 aaKnown RBP15.25■□□□□ 0.03
CMTM3-215ENST00000568477 HEXIM2Q96MH2 286 aaKnown RBP15.25■□□□□ 0.03
CMTM3-215ENST00000568477 CEP63Q96MT8 703 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 METTL14Q9HCE5 456 aaKnown RBP15.25■□□□□ 0.03
CMTM3-215ENST00000568477 TBC1D14Q9P2M4 693 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 SLC8A2Q9UPR5 921 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 SCML2Q9UQR0 700 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 COQ4Q9Y3A0 265 aa15.25■□□□□ 0.03
CMTM3-215ENST00000568477 E2F8A0AVK6 867 aa15.24■□□□□ 0.03
CMTM3-215ENST00000568477 HHLA1C9JL84 531 aa15.24■□□□□ 0.03
CMTM3-215ENST00000568477 TLR5O60602 858 aa15.24■□□□□ 0.03
CMTM3-215ENST00000568477 ADH1CP00326 375 aa15.24■□□□□ 0.03
CMTM3-215ENST00000568477 CD44P16070 742 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms