RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 MTMR12Q9C0I1 747 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 DNAI2Q9GZS0 605 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 EPC1Q9H2F5 836 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 TRPC7Q9HCX4 862 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 INTS13Q9NVM9 706 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 KBTBD4Q9NVX7 518 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 DUS2Q9NX74 493 aaKnown RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 GTSE1Q9NYZ3 720 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 HSPBP1Q9NZL4 362 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 TRPM5Q9NZQ8 1165 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 STIM2Q9P246 746 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 GTF3C4Q9UKN8 822 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 CDV3Q9UKY7 258 aaKnown RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 CDH9Q9ULB4 789 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 L1RE1Q9UN81 338 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 SMG5Q9UPR3 1016 aaKnown RBP4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 PCDHB3Q9Y5E6 796 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 OBSL1O75147 1896 aa4.98□□□□□ -1.61
HERPUD1-213ENST00000568358 ATP8B3O60423 1300 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 UBE4BO95155 1302 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 CFAP54Q96N23 3096 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 THADAQ6YHU6 1953 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 PVALEFA0A1B0GWK0 134 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 FAM221BA6H8Z2 402 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 CHURC1-FNTBB4DL54 471 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 ARNTLO00327 626 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 SLC9A3R1O14745 358 aaPredicted RBP4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 GABRDO14764 452 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 GIPC1O14908 333 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 CLIC2O15247 247 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 EXOC3O60645 756 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 LRP3O75074 770 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 KIF20AO95235 890 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 RETP07949 1114 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 CCDC192P0DO97 292 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 ZSCAN22P10073 491 aaPredicted RBP4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 P4HA1P13674 534 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 PFKLP17858 780 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 DRD1P21728 446 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 BDNFP23560 247 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 ATICP31939 592 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 MAGEA11P43364 429 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 AFMP43652 599 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 SOX9P48436 509 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 FNTBP49356 437 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 CYP2J2P51589 502 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 AP3M2P53677 418 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 GYS2P54840 703 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 SATB1Q01826 763 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 FAM160A1Q05DH4 1040 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 TNK2Q07912 1038 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 SOWAHAQ2M3V2 549 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 WDR72Q3MJ13 1102 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 FOXD4L6Q3SYB3 417 aaPredicted RBP4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 MAP9Q49MG5 647 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 KMT5BQ4FZB7 885 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 CFAP221Q4G0U5 840 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 FBXO43Q4G163 708 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 OXLD1Q5BKU9 147 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 ZFYVE27Q5T4F4 411 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 SDHAF4Q5VUM1 108 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 TDRD10Q5VZ19 366 aaKnown RBP4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 LMBRD2Q68DH5 695 aaPredicted RBP4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 TXNDC8Q6A555 127 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 FAM171BQ6P995 826 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 BRICD5Q6PL45 260 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 FOXD4L3Q6VB84 417 aaPredicted RBP4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 DENND5BQ6ZUT9 1274 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 UNC13DQ70J99 1090 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 TRAPPC11Q7Z392 1133 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 NELFCDQ8IXH7 590 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 STKLD1Q8NE28 680 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 ZSWIM2Q8NEG5 633 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 MYCBPAPQ8TBZ2 947 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 ZNF507Q8TCN5 953 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 NELL1Q92832 810 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 USP13Q92995 863 aaPredicted RBP4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 ATP2A3Q93084 1043 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 SNX21Q969T3 373 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 SYAP1Q96A49 352 aaPredicted RBP4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 CCDC127Q96BQ5 260 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 RMDN1Q96DB5 314 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 RSPRY1Q96DX4 576 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 TRMT2BQ96GJ1 504 aaKnown RBP4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 MYO19Q96H55 970 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 CCDC34Q96HJ3 373 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 SPATA17Q96L03 361 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 MYRFLQ96LU7 910 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 SLITRK1Q96PX8 696 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 SRPK1Q96SB4 655 aaKnown RBP4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 USB1Q9BQ65 265 aaKnown RBP4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 SYT15Q9BQS2 421 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 NIF3L1Q9GZT8 377 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 ZNF700Q9H0M5 742 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 SMG9Q9H0W8 520 aaKnown RBP4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 IKZF4Q9H2S9 585 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 EBF3Q9H4W6 596 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 RBM12Q9NTZ6 932 aaKnown RBP4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 TMLHEQ9NVH6 421 aa4.97□□□□□ -1.61
HERPUD1-213ENST00000568358 ZNF358Q9NW07 568 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms