RNA–Protein interactions for RNA: ENST00000568254.5

RSRP1-217, Transcript of arginine and serine rich protein 1, humanhuman

TSL 1 (best)

Gene RSRP1, Length 2,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSRP1-217ENST00000568254 LRRC1Q9BTT6 524 aa16.33■□□□□ 0.21
RSRP1-217ENST00000568254 ULBP1Q9BZM6 244 aa16.33■□□□□ 0.21
RSRP1-217ENST00000568254 KLHL11Q9NVR0 708 aa16.33■□□□□ 0.21
RSRP1-217ENST00000568254 ABI2Q9NYB9 513 aaPredicted RBP16.33■□□□□ 0.21
RSRP1-217ENST00000568254 PCSK1NQ9UHG2 260 aa16.33■□□□□ 0.21
RSRP1-217ENST00000568254 MYO16Q9Y6X6 1858 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 GREB1Q4ZG55 1949 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 TCRBV7S2A1N4TA0A589 114 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 OR6C75A6NL08 312 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 ZBBXA8MT70 800 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 TBC1D4O60343 1298 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 FBXO21O94952 628 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 CHRM1P11229 460 aaPredicted RBP16.33■□□□□ 0.2
RSRP1-217ENST00000568254 PCK1P35558 622 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 GRIK1P39086 918 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 FPGSQ05932 587 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 CLUL1Q15846 466 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 NFE2Q16621 373 aaPredicted RBP16.33■□□□□ 0.2
RSRP1-217ENST00000568254 SMTNL2Q2TAL5 461 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 KCNT1Q5JUK3 1230 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 ZFYVE27Q5T4F4 411 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 CCDC50Q8IVM0 306 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 CMTR2Q8IYT2 770 aaKnown RBP16.33■□□□□ 0.2
RSRP1-217ENST00000568254 ZDHHC14Q8IZN3 488 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 KRT12Q99456 494 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 VN1R3Q9BXE9 311 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 PARD6BQ9BYG5 372 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 ZWILCHQ9H900 591 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 CNGB3Q9NQW8 809 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 USP18Q9UMW8 372 aa16.33■□□□□ 0.2
RSRP1-217ENST00000568254 MRPL42Q9Y6G3 142 aaKnown RBP16.33■□□□□ 0.2
RSRP1-217ENST00000568254 CCDC188H7C350 402 aa16.32■□□□□ 0.2
RSRP1-217ENST00000568254 HSF2BPO75031 334 aa16.32■□□□□ 0.2
RSRP1-217ENST00000568254 USP17L7P0C7H9 530 aa16.32■□□□□ 0.2
RSRP1-217ENST00000568254 TFE3P19532 575 aaPredicted RBP16.32■□□□□ 0.2
RSRP1-217ENST00000568254 DAOAP59103 153 aa16.32■□□□□ 0.2
RSRP1-217ENST00000568254 YWHAZP63104 245 aaKnown RBP16.32■□□□□ 0.2
RSRP1-217ENST00000568254 MRPS25P82663 173 aaKnown RBP16.32■□□□□ 0.2
RSRP1-217ENST00000568254 PRSS55Q6UWB4 352 aaPredicted RBP16.32■□□□□ 0.2
RSRP1-217ENST00000568254 HFE2Q6ZVN8 426 aa16.32■□□□□ 0.2
RSRP1-217ENST00000568254 ANKS3Q6ZW76 656 aa16.32■□□□□ 0.2
RSRP1-217ENST00000568254 ANKS1BQ7Z6G8 1248 aa16.32■□□□□ 0.2
RSRP1-217ENST00000568254 KLHL7Q8IXQ5 586 aa16.32■□□□□ 0.2
RSRP1-217ENST00000568254 RNF168Q8IYW5 571 aaPredicted RBP16.32■□□□□ 0.2
RSRP1-217ENST00000568254 C7orf61Q8IZ16 206 aa16.32■□□□□ 0.2
RSRP1-217ENST00000568254 DEFB106AQ8N104 65 aa16.32■□□□□ 0.2
RSRP1-217ENST00000568254 FAM172AQ8WUF8 416 aa16.32■□□□□ 0.2
RSRP1-217ENST00000568254 RNF25Q96BH1 459 aaPredicted RBP16.32■□□□□ 0.2
RSRP1-217ENST00000568254 ACSF2Q96CM8 615 aaPredicted RBP16.32■□□□□ 0.2
RSRP1-217ENST00000568254 FUBP3Q96I24 572 aaKnown RBP eCLIP16.32■□□□□ 0.2
RSRP1-217ENST00000568254 PGLYRP2Q96PD5 576 aa16.32■□□□□ 0.2
RSRP1-217ENST00000568254 DDX23Q9BUQ8 820 aaKnown RBP16.32■□□□□ 0.2
RSRP1-217ENST00000568254 ADAM33Q9BZ11 813 aa16.32■□□□□ 0.2
RSRP1-217ENST00000568254 PNPLA8Q9NP80 782 aa16.32■□□□□ 0.2
RSRP1-217ENST00000568254 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.32■□□□□ 0.25e-6■□□□□ 9.6
RSRP1-217ENST00000568254 YJEFN3A6XGL0 299 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 E7ENQ6 273 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 PI4K2BG5E9Z4 385 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 H7C4K7 107 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 FSCN2O14926 492 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 TRUB2O95900 331 aaKnown RBP16.31■□□□□ 0.2
RSRP1-217ENST00000568254 KRT7P08729 469 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 MATKP42679 507 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 PTPN9P43378 593 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 EPHB4P54760 987 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 ARPP19P56211 112 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 SMC1AQ14683 1233 aaKnown RBP16.31■□□□□ 0.2
RSRP1-217ENST00000568254 USP41Q3LFD5 358 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 RCOR2Q8IZ40 523 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 ANKRD7Q92527 254 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 RAPGEF5Q92565 580 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 ZNF558Q96NG5 402 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 YME1L1Q96TA2 773 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 HERPUD2Q9BSE4 406 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 C11orf84Q9BUA3 381 aaPredicted RBP16.31■□□□□ 0.2
RSRP1-217ENST00000568254 DDX47Q9H0S4 455 aaKnown RBP16.31■□□□□ 0.2
RSRP1-217ENST00000568254 NGRNQ9NPE2 291 aaKnown RBP16.31■□□□□ 0.2
RSRP1-217ENST00000568254 DDX56Q9NY93 547 aaKnown RBP16.31■□□□□ 0.2
RSRP1-217ENST00000568254 ZBED1O96006 694 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 KRT1P04264 644 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 GLI1P08151 1106 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 SCN4BQ8IWT1 228 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 SLC39A11Q8N1S5 342 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 ATAD1Q8NBU5 361 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 SCAMP5Q8TAC9 235 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 HDAC7Q8WUI4 952 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 CENPIQ92674 756 aaPredicted RBP16.31■□□□□ 0.2
RSRP1-217ENST00000568254 SLITRK1Q96PX8 696 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 PEBP4Q96S96 227 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 PNKPQ96T60 521 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 CXXC1Q9P0U4 656 aaPredicted RBP16.31■□□□□ 0.2
RSRP1-217ENST00000568254 PCDHB5Q9Y5E4 795 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 USP3Q9Y6I4 520 aa16.31■□□□□ 0.2
RSRP1-217ENST00000568254 TNFRSF10BO14763 440 aa16.3■□□□□ 0.2
RSRP1-217ENST00000568254 SART1O43290 800 aaKnown RBP16.3■□□□□ 0.2
RSRP1-217ENST00000568254 DAB1O75553 588 aa16.3■□□□□ 0.2
RSRP1-217ENST00000568254 FYNP06241 537 aa16.3■□□□□ 0.2
RSRP1-217ENST00000568254 RALAP11233 206 aa16.3■□□□□ 0.2
RSRP1-217ENST00000568254 CPB1P15086 417 aa16.3■□□□□ 0.2
RSRP1-217ENST00000568254 SYN1P17600 705 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms