RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 SDHAF4Q5VUM1 108 aa10.96□□□□□ -0.65
TCF4-236ENST00000567880 RNF19BQ6ZMZ0 732 aa10.96□□□□□ -0.65
TCF4-236ENST00000567880 DDX53Q86TM3 631 aaKnown RBP10.96□□□□□ -0.65
TCF4-236ENST00000567880 ZDHHC17Q8IUH5 632 aa10.96□□□□□ -0.65
TCF4-236ENST00000567880 STKLD1Q8NE28 680 aa10.96□□□□□ -0.65
TCF4-236ENST00000567880 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.96□□□□□ -0.65
TCF4-236ENST00000567880 AUTS2Q8WXX7 1259 aa10.96□□□□□ -0.65
TCF4-236ENST00000567880 PIK3R5Q8WYR1 880 aa10.96□□□□□ -0.65
TCF4-236ENST00000567880 KCTD13Q8WZ19 329 aa10.96□□□□□ -0.65
TCF4-236ENST00000567880 HERC2P3Q9BVR0 1158 aa10.96□□□□□ -0.65
TCF4-236ENST00000567880 ULBP1Q9BZM6 244 aa10.96□□□□□ -0.65
TCF4-236ENST00000567880 CSNK1G1Q9HCP0 422 aa10.96□□□□□ -0.65
TCF4-236ENST00000567880 CHST7Q9NS84 486 aa10.96□□□□□ -0.65
TCF4-236ENST00000567880 MTRRQ9UBK8 725 aa10.96□□□□□ -0.65
TCF4-236ENST00000567880 CDC23Q9UJX2 597 aa10.96□□□□□ -0.65
TCF4-236ENST00000567880 SLC27A5Q9Y2P5 690 aa10.96□□□□□ -0.65
TCF4-236ENST00000567880 MTMR11A4FU01 709 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 GRXCR1A8MXD5 290 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 HHLA1C9JL84 531 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 TBC1D4O60343 1298 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 SOAT2O75908 522 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 URODP06132 367 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 USP17L7P0C7H9 530 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 LINC00271P0C7V0 271 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 MYOGP15173 224 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 TCP1P17987 556 aaKnown RBP10.96□□□□□ -0.66
TCF4-236ENST00000567880 CTNNB1P35222 781 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 GJC1P36383 396 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 FLT3P36888 993 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 RPL34P49207 117 aaKnown RBP10.96□□□□□ -0.66
TCF4-236ENST00000567880 GPR15P49685 360 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 ROR1Q01973 937 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 GPR17Q13304 367 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 SHHQ15465 462 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 DDR2Q16832 855 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 MGAT5BQ3V5L5 792 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 CFAP221Q4G0U5 840 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 FAM109BQ6ICB4 259 aaPredicted RBP10.96□□□□□ -0.66
TCF4-236ENST00000567880 TNS4Q8IZW8 715 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 KLHL23Q8NBE8 558 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 COG1Q8WTW3 980 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 KRT35Q92764 455 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 CLP1Q92989 425 aaKnown RBP10.96□□□□□ -0.66
TCF4-236ENST00000567880 HES6Q96HZ4 224 aa10.96□□□□□ -0.66
TCF4-236ENST00000567880 FUBP3Q96I24 572 aaKnown RBP eCLIP10.96□□□□□ -0.66
TCF4-236ENST00000567880 SEPT5Q99719 369 aaPredicted RBP10.96□□□□□ -0.66
TCF4-236ENST00000567880 WDR27A2RRH5 827 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 PDGFRAP16234 1089 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 GPD1P21695 349 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 SLC1A1P43005 524 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 MARCKSL1P49006 195 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 MRPS5P82675 430 aaKnown RBP10.95□□□□□ -0.66
TCF4-236ENST00000567880 DSG1Q02413 1049 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 ADCY1Q08828 1119 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 PIGHQ14442 188 aaPredicted RBP10.95□□□□□ -0.66
TCF4-236ENST00000567880 CDO1Q16878 200 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 TRNP1Q6NT89 227 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 SLC26A9Q7LBE3 791 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 UBL4BQ8N7F7 174 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 SP7Q8TDD2 431 aaPredicted RBP10.95□□□□□ -0.66
TCF4-236ENST00000567880 GPR152Q8TDT2 470 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 RXFP2Q8WXD0 754 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 CFAP57Q96MR6 1250 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 CLSTN3Q9BQT9 956 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 OXCT2Q9BYC2 517 aaPredicted RBP10.95□□□□□ -0.66
TCF4-236ENST00000567880 L2HGDHQ9H9P8 463 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 TMEM59LQ9UK28 342 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 MTUS1Q9ULD2 1270 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 BACE2Q9Y5Z0 518 aa10.95□□□□□ -0.66
TCF4-236ENST00000567880 CHD7Q9P2D1 2997 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 C2CD4BA6NLJ0 364 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 DDX3YO15523 660 aaKnown RBP10.94□□□□□ -0.66
TCF4-236ENST00000567880 C7P10643 843 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 VAMP1P23763 118 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 SLC5A3P53794 718 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 ATP11AP98196 1134 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 DUSP4Q13115 394 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 C15orf59Q2T9L4 293 aaPredicted RBP10.94□□□□□ -0.66
TCF4-236ENST00000567880 RAB41Q5JT25 222 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 EFHC1Q5JVL4 640 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 RASIP1Q5U651 963 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 SLC8B1Q6J4K2 584 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 CC2D1AQ6P1N0 951 aaPredicted RBP10.94□□□□□ -0.66
TCF4-236ENST00000567880 VSTM1Q6UX27 236 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 SCAMP5Q8TAC9 235 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 SPPL2BQ8TCT7 592 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 ALG3Q92685 438 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 KHSRPQ92945 711 aaKnown RBP eCLIP10.94□□□□□ -0.662e-6■■■□□ 17.4
TCF4-236ENST00000567880 CARD6Q9BX69 1037 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 UBXN6Q9BZV1 441 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 CRISPLD1Q9H336 500 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 ALG13Q9NP73 1137 aaKnown RBP10.94□□□□□ -0.66
TCF4-236ENST00000567880 CNGB3Q9NQW8 809 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 MRPL17Q9NRX2 175 aaKnown RBP10.94□□□□□ -0.66
TCF4-236ENST00000567880 EHD2Q9NZN4 543 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 PLXNA3P51805 1871 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 PDE4DIPQ5VU43 2346 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 LAMA3Q16787 3333 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 LINC01553A4QN01 128 aa10.94□□□□□ -0.66
TCF4-236ENST00000567880 MIF4GDA9UHW6 222 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms