RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 FBXO6Q9NRD1 293 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 SLC13A4Q9UKG4 626 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 SNX9Q9Y5X1 595 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 RGS5O15539 181 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 SUPT7LO94864 414 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 APOA4P06727 396 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 ME2P23368 584 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 SP100P23497 879 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 PPARGP37231 505 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 ALDH1A3P47895 512 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 PKNOX1P55347 436 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 ARPP19P56211 112 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 SNRPFP62306 86 aaKnown RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 TRAF2Q12933 501 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 ITGADQ13349 1161 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 AGKQ53H12 422 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 CYP2R1Q6VVX0 501 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 NANOGNBQ7Z5D8 188 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 KCTD17Q8N5Z5 321 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 RNPEPQ9H4A4 650 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 SYBUQ9NX95 663 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 KCNK4Q9NYG8 393 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 ACTL7BQ9Y614 415 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 SDR42E2A6NKP2 422 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 HNRNPCL2B2RXH8 293 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 ABLIM1O14639 778 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 BNIP3LO60238 219 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 WFS1O76024 890 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 VAV1P15498 845 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 SEZ6Q53EL9 994 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 C4orf22Q6V702 233 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 DHDDSQ86SQ9 333 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 SNX32Q86XE0 403 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 ZNF280CQ8ND82 737 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 TSPAN17Q96FV3 270 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 NOL6Q9H6R4 1146 aaKnown RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 JPH1Q9HDC5 661 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 TMA7Q9Y2S6 64 aaKnown RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 CAB39Q9Y376 341 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 AP3B1O00203 1094 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 RPS6KA4O75676 772 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 SERPINE1P05121 402 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 VEGFAP15692 232 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 EFNA5P52803 228 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 PDK1Q15118 436 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 SZRD1Q7Z422 152 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 EMC1Q8N766 993 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 RIT2Q99578 217 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 FRMD8P1Q9BZ68 369 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 NEUROG2Q9H2A3 272 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 GPATCH2LQ9NWQ4 482 aa12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 RUVBL2Q9Y230 463 aaKnown RBP12.82□□□□□ -0.36
CSPG4P13-202ENST00000567704 GTF2H3Q13889 308 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 XKR3Q5GH77 459 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 BNIPLQ7Z465 357 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 HORMAD1Q86X24 394 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 CROCCP3Q8IVE0 287 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 TNIP2Q8NFZ5 429 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 ART4Q93070 314 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 TUBGCP3Q96CW5 907 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 EPAS1Q99814 870 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 C17orf80Q9BSJ5 609 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 CYP4F12Q9HCS2 524 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 ATAD3AQ9NVI7 634 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 NYAP2Q9P242 653 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 GH1P01241 217 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 TRIM25Q14258 630 aaKnown RBP12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 SV2AQ7L0J3 742 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 EFCAB3Q8N7B9 438 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 HES6Q96HZ4 224 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 FAM53CQ9NYF3 392 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 GRIN2DO15399 1336 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 ADGRA2Q96PE1 1338 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 TCHHQ07283 1943 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 A0A087WXM4 84 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 HEATR9A2RTY3 570 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 F8W8V4 182 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 C21orf2O43822 256 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 HSD17B4P51659 736 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 KIZQ2M2Z5 673 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 ZFP1Q6P2D0 407 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 SMIM5Q71RC9 77 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 OTOAQ7RTW8 1153 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 SHCBP1Q8NEM2 672 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 MXRA8Q9BRK3 442 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 RMI1Q9H9A7 625 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 PLEKHA5Q9HAU0 1116 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 RPL26L1Q9UNX3 145 aaKnown RBP12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 ADCY6O43306 1168 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 YY1P25490 414 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 GSCP56915 257 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 IL17AQ16552 155 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 DGKDQ16760 1214 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 CBWD6Q4V339 395 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 CBWD3Q5JTY5 395 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 SPDYAQ5MJ70 313 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 CBWD5Q5RIA9 395 aa12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 OTUD3Q5T2D3 398 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P13-202ENST00000567704 NOP9Q86U38 636 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms