RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 CYFIP2Q96F07 1278 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 FAM81BQ96LP2 452 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 MED10Q9BTT4 135 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 ZNF518BQ9C0D4 1074 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 DPEP3Q9H4B8 488 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 CYLDQ9NQC7 956 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 HPS4Q9NQG7 708 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 NDRG2Q9UN36 371 aaKnown RBP11.85□□□□□ -0.51
CDH3-206ENST00000567674 MAPK8IP1Q9UQF2 711 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 SCML2Q9UQR0 700 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 CCL26Q9Y258 94 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 FANCMQ8IYD8 2048 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 PTPRDP23468 1912 aa11.85□□□□□ -0.51
CDH3-206ENST00000567674 GREB1Q4ZG55 1949 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 LEFTY2O00292 366 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 HCRTO43612 131 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 AP1G2O75843 785 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 GJA4P35212 333 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 GCLMP48507 274 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 SLC5A3P53794 718 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 USP46P62068 366 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 UBE2HP62256 183 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 GOLGA8FQ08AF8 430 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 GOLGA8DPQ0D2H9 430 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 COL9A2Q14055 689 aaPredicted RBP11.84□□□□□ -0.51
CDH3-206ENST00000567674 E2F5Q15329 346 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 STILQ15468 1287 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 SDHAF4Q5VUM1 108 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 ARHGAP17Q68EM7 881 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 ANKRD40Q6AI12 368 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 ACOT1Q86TX2 421 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 LONP2Q86WA8 852 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 ARHGAP18Q8N392 663 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 FBXO32Q969P5 355 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 FAM84AQ96KN4 292 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 CYP2S1Q96SQ9 504 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 SDCBP2Q9H190 292 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 TRPC7Q9HCX4 862 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 CLIC5Q9NZA1 410 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 USP3Q9Y6I4 520 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 CACNA1IQ9P0X4 2223 aa11.84□□□□□ -0.51
CDH3-206ENST00000567674 PATJQ8NI35 1801 aa11.83□□□□□ -0.51
CDH3-206ENST00000567674 C2orf78A6NCI8 922 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.83□□□□□ -0.52
CDH3-206ENST00000567674 LRRN2O75325 713 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 TNK2Q07912 1038 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 CT47A1Q5JQC4 288 aaPredicted RBP11.83□□□□□ -0.52
CDH3-206ENST00000567674 TXNDC11Q6PKC3 985 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 HTR3DQ70Z44 454 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 SYT13Q7L8C5 426 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 CCDC186Q7Z3E2 898 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 C11orf74Q86VG3 221 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 WDR5BQ86VZ2 330 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 SCML4Q8N228 414 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 SLC2A14Q8TDB8 520 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 WHAMMQ8TF30 809 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 CD101Q93033 1021 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 SLC35C1Q96A29 364 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 ACDQ96AP0 544 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 TMEM176AQ96HP8 235 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 LOXL4Q96JB6 756 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 SLC22A12Q96S37 553 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 KCNK16Q96T55 309 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 SMOQ99835 787 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 P2RY13Q9BPV8 354 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 DUSP16Q9BY84 665 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 RNF38Q9H0F5 515 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 EBF3Q9H4W6 596 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 APOBEC3GQ9HC16 384 aaKnown RBP11.83□□□□□ -0.52
CDH3-206ENST00000567674 KRT82Q9NSB4 513 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 CHMP5Q9NZZ3 219 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 EBF1Q9UH73 591 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 ZNF510Q9Y2H8 683 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 R4GN57 208 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 TICRRQ7Z2Z1 1910 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 OBSL1O75147 1896 aa11.83□□□□□ -0.52
CDH3-206ENST00000567674 ADH1CP00326 375 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 ATP5C1P36542 298 aaKnown RBP11.82□□□□□ -0.52
CDH3-206ENST00000567674 GALK1P51570 392 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 KIF11P52732 1056 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 MRPS21P82921 87 aaKnown RBP11.82□□□□□ -0.52
CDH3-206ENST00000567674 MORC3Q14149 939 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 PON2Q15165 354 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 MEA1Q16626 185 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 CLEC17AQ6ZS10 378 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 CLEC20AQ6ZU45 233 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 ANKRD52Q8NB46 1076 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 ZMIZ2Q8NF64 920 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 CHAMP1Q96JM3 812 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 ZFYVE19Q96K21 471 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 IRX2Q9BZI1 471 aaPredicted RBP11.82□□□□□ -0.52
CDH3-206ENST00000567674 CISHQ9NSE2 258 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 TMEM30AQ9NV96 361 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 RAB23Q9ULC3 237 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 CPQQ9Y646 472 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 ANAPC1Q9H1A4 1944 aa11.82□□□□□ -0.52
CDH3-206ENST00000567674 CHD6Q8TD26 2715 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 HHLA1C9JL84 531 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 K7ESF4 209 aa11.81□□□□□ -0.52
CDH3-206ENST00000567674 CLDN5O00501 218 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms