RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 LRRC10BA6NIK2 292 aa22.82■■□□□ 1.24
NME3-210ENST00000567271 TPM2P07951 284 aa22.82■■□□□ 1.24
NME3-210ENST00000567271 BRD2P25440 801 aaKnown RBP22.82■■□□□ 1.24
NME3-210ENST00000567271 BST2Q10589 180 aaKnown RBP22.82■■□□□ 1.24
NME3-210ENST00000567271 STILQ15468 1287 aa22.82■■□□□ 1.24
NME3-210ENST00000567271 PKDCCQ504Y2 493 aa22.82■■□□□ 1.24
NME3-210ENST00000567271 ARHGAP29Q52LW3 1261 aa22.82■■□□□ 1.24
NME3-210ENST00000567271 RAB41Q5JT25 222 aa22.82■■□□□ 1.24
NME3-210ENST00000567271 DHX40Q8IX18 779 aaKnown RBP22.82■■□□□ 1.24
NME3-210ENST00000567271 ANKRD20A12PQ8NF67 263 aa22.82■■□□□ 1.24
NME3-210ENST00000567271 UBA3Q8TBC4 463 aa22.82■■□□□ 1.24
NME3-210ENST00000567271 SHC3Q92529 594 aa22.82■■□□□ 1.24
NME3-210ENST00000567271 MFSD1Q9H3U5 465 aa22.82■■□□□ 1.24
NME3-210ENST00000567271 THG1LQ9NWX6 298 aaKnown RBP22.82■■□□□ 1.24
NME3-210ENST00000567271 AJAP1Q9UKB5 411 aaPredicted RBP22.82■■□□□ 1.24
NME3-210ENST00000567271 ARHGAP26Q9UNA1 814 aa22.82■■□□□ 1.24
NME3-210ENST00000567271 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.82■■□□□ 1.24
NME3-210ENST00000567271 SMTNL1A8MU46 457 aa22.81■■□□□ 1.24
NME3-210ENST00000567271 BECN2A8MW95 431 aa22.81■■□□□ 1.24
NME3-210ENST00000567271 TULP2O00295 520 aa22.81■■□□□ 1.24
NME3-210ENST00000567271 ARNTLO00327 626 aa22.81■■□□□ 1.24
NME3-210ENST00000567271 XPO1O14980 1071 aaKnown RBP22.81■■□□□ 1.24
NME3-210ENST00000567271 CYP26A1O43174 497 aa22.81■■□□□ 1.24
NME3-210ENST00000567271 CDK11BP21127 795 aaKnown RBP22.81■■□□□ 1.24
NME3-210ENST00000567271 PGFP49763 221 aa22.81■■□□□ 1.24
NME3-210ENST00000567271 ZNF165P49910 485 aa22.81■■□□□ 1.24
NME3-210ENST00000567271 COPB1P53618 953 aaKnown RBP22.81■■□□□ 1.24
NME3-210ENST00000567271 SLC7A9P82251 487 aa22.81■■□□□ 1.24
NME3-210ENST00000567271 HECTD3Q5T447 861 aa22.81■■□□□ 1.24
NME3-210ENST00000567271 KLHDC7AQ5VTJ3 777 aa22.81■■□□□ 1.24
NME3-210ENST00000567271 CCDC186Q7Z3E2 898 aa22.81■■□□□ 1.24
NME3-210ENST00000567271 RIN3Q8TB24 985 aa22.81■■□□□ 1.24
NME3-210ENST00000567271 TLR8Q9NR97 1041 aaKnown RBP22.81■■□□□ 1.24
NME3-210ENST00000567271 SETSIPP0DME0 302 aa22.8■■□□□ 1.24
NME3-210ENST00000567271 TCF3P15923 654 aa22.8■■□□□ 1.24
NME3-210ENST00000567271 TUBP50607 506 aa22.8■■□□□ 1.24
NME3-210ENST00000567271 STARD6P59095 220 aa22.8■■□□□ 1.24
NME3-210ENST00000567271 PRKCQQ04759 706 aa22.8■■□□□ 1.24
NME3-210ENST00000567271 MLF2Q15773 248 aaPredicted RBP22.8■■□□□ 1.24
NME3-210ENST00000567271 SUGP1Q8IWZ8 645 aaKnown RBP22.8■■□□□ 1.24
NME3-210ENST00000567271 ZFYVE19Q96K21 471 aa22.8■■□□□ 1.24
NME3-210ENST00000567271 LSM14BQ9BX40 385 aaKnown RBP22.8■■□□□ 1.24
NME3-210ENST00000567271 HEBP1Q9NRV9 189 aa22.8■■□□□ 1.24
NME3-210ENST00000567271 COCHO43405 550 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 USP8P40818 1118 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 PLA2G4AP47712 749 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 ZXDBP98169 803 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 PLCB2Q00722 1185 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 USP4Q13107 963 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 ZNF77Q15935 545 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 FKBP15Q5T1M5 1219 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 APTXQ7Z2E3 356 aaKnown RBP22.79■■□□□ 1.24
NME3-210ENST00000567271 FLCNQ8NFG4 579 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 SH3RF2Q8TEC5 729 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 SLC35F5Q8WV83 523 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 KCTD13Q8WZ19 329 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 SHDQ96IW2 340 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 CCSER2Q9H7U1 834 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 NMUR1Q9HB89 426 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 PLCB1Q9NQ66 1216 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 OSER1Q9NX31 292 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 ZDBF2Q9HCK1 2354 aa22.79■■□□□ 1.24
NME3-210ENST00000567271 M0QYV0 167 aa22.78■■□□□ 1.24
NME3-210ENST00000567271 FOXN3O00409 490 aaPredicted RBP22.78■■□□□ 1.24
NME3-210ENST00000567271 ATP1A3P13637 1013 aa22.78■■□□□ 1.24
NME3-210ENST00000567271 TKTL1P51854 596 aa22.78■■□□□ 1.24
NME3-210ENST00000567271 IQCB1Q15051 598 aa22.78■■□□□ 1.24
NME3-210ENST00000567271 ZSCAN23Q3MJ62 389 aa22.78■■□□□ 1.24
NME3-210ENST00000567271 CWF19L1Q69YN2 538 aaKnown RBP22.78■■□□□ 1.24
NME3-210ENST00000567271 SCD5Q86SK9 330 aa22.78■■□□□ 1.24
NME3-210ENST00000567271 ZNF606Q8WXB4 792 aa22.78■■□□□ 1.24
NME3-210ENST00000567271 SECISBP2LQ93073 1101 aaKnown RBP22.78■■□□□ 1.24
NME3-210ENST00000567271 FAM83CQ9BQN1 747 aa22.78■■□□□ 1.24
NME3-210ENST00000567271 DDX23Q9BUQ8 820 aaKnown RBP22.78■■□□□ 1.24
NME3-210ENST00000567271 NAA15Q9BXJ9 866 aaKnown RBP22.78■■□□□ 1.24
NME3-210ENST00000567271 TBC1D17Q9HA65 648 aa22.78■■□□□ 1.24
NME3-210ENST00000567271 ACP6Q9NPH0 428 aa22.78■■□□□ 1.24
NME3-210ENST00000567271 GKN1Q9NS71 199 aa22.78■■□□□ 1.24
NME3-210ENST00000567271 CPQQ9Y646 472 aa22.78■■□□□ 1.24
NME3-210ENST00000567271 A0A1W2PQH9 124 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 LGALS16A8MUM7 142 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 LEFTY2O00292 366 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 TLR5O60602 858 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 MBL2P11226 248 aaPredicted RBP22.77■■□□□ 1.24
NME3-210ENST00000567271 UCHL3P15374 230 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 RFX1P22670 979 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 GNA15P30679 374 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 CLCN5P51795 746 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 MTF1Q14872 753 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 PM20D1Q6GTS8 502 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 ASTLQ6HA08 431 aaPredicted RBP22.77■■□□□ 1.24
NME3-210ENST00000567271 PMF1Q6P1K2 205 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 CC2D1AQ6P1N0 951 aaPredicted RBP22.77■■□□□ 1.24
NME3-210ENST00000567271 CSGALNACT1Q8TDX6 532 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 LRRC4Q9HBW1 653 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 CYLDQ9NQC7 956 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 SMPD4Q9NXE4 827 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 FHOD1Q9Y613 1164 aa22.77■■□□□ 1.24
NME3-210ENST00000567271 STK25O00506 426 aa22.76■■□□□ 1.23
NME3-210ENST00000567271 THAP12O43422 761 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms