RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 PRAMEF19Q5SWL8 479 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 C1orf220Q5T0J3 134 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 UNC45BQ8IWX7 931 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 ALLCQ8N6M5 410 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 NLGN2Q8NFZ4 835 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 TMEM237Q96Q45 408 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 FSD1LQ9BXM9 530 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 PLEKHA5Q9HAU0 1116 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 DDIT4Q9NX09 232 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 TNFSF13BQ9Y275 285 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 L3MBTL1Q9Y468 752 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 GLI3P10071 1580 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 PAEPP09466 180 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 AMPD1P23109 780 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 PGM1P36871 562 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 FAAP100Q0VG06 881 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 FBXO47Q5MNV8 452 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 SPOUT1Q5T280 376 aaKnown RBP12.04□□□□□ -0.48
CDH1-210ENST00000566612 TTC39BQ5VTQ0 682 aaPredicted RBP12.04□□□□□ -0.48
CDH1-210ENST00000566612 C1orf146Q5VVC0 180 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 FUKQ8N0W3 1084 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 STAMBPL1Q96FJ0 436 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 TEPSINQ96N21 525 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 SLC24A2Q9UI40 661 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 MYH11P35749 1972 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 RRN3P2A6NIE6 340 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 APOC4-APOC2K7ER74 178 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 AVILO75366 819 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 APOC2P02655 101 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 CCDC130P13994 396 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 ARF4P18085 180 aaPredicted RBP12.04□□□□□ -0.48
CDH1-210ENST00000566612 MX2P20592 715 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 KBTBD12Q3ZCT8 623 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 ZC3H12AQ5D1E8 599 aaKnown RBP12.04□□□□□ -0.48
CDH1-210ENST00000566612 EFHC1Q5JVL4 640 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 TFB1MQ8WVM0 346 aaKnown RBP12.04□□□□□ -0.48
CDH1-210ENST00000566612 CKAP2Q8WWK9 683 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 E2F7Q96AV8 911 aa12.04□□□□□ -0.48
CDH1-210ENST00000566612 ZNF669Q96BR6 464 aaPredicted RBP12.04□□□□□ -0.48
CDH1-210ENST00000566612 A0A1W2PPM1 405 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 FSBPO95073 299 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 EPHB2P29323 1055 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 HADHBP55084 474 aaKnown RBP12.03□□□□□ -0.48
CDH1-210ENST00000566612 PDK2Q15119 407 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 NAV1Q8NEY1 1877 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 SLC2A14Q8TDB8 520 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 PPCSQ9HAB8 311 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 LOC100653049A0A140TA62 436 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 GPR25O00155 361 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 OPHN1O60890 802 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 KRT34O76011 436 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 CD48P09326 243 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 DCAF4L1Q3SXM0 396 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 TAF1BQ53T94 588 aaPredicted RBP12.03□□□□□ -0.48
CDH1-210ENST00000566612 TMEM192Q8IY95 271 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 KIRREL3Q8IZU9 778 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 CENPTQ96BT3 561 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 UBP1Q9NZI7 540 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 ITGA11Q9UKX5 1188 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 RPS6KL1Q9Y6S9 549 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 B2RBV5 119 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 KCNK1O00180 336 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 TULP2O00295 520 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 CYB561D2O14569 222 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 SPAG6O75602 509 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 CELF2O95319 508 aaKnown RBP12.03□□□□□ -0.48
CDH1-210ENST00000566612 CYP1A1P04798 512 aaPredicted RBP12.03□□□□□ -0.48
CDH1-210ENST00000566612 MAP3K7CLP57077 242 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 SV2CQ496J9 727 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 TXNRD3NBQ6F5E7 133 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 CES3Q6UWW8 571 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 FAM183BPQ6ZVS7 135 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 HASPINQ8TF76 798 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 PARK7Q99497 189 aaKnown RBP12.03□□□□□ -0.48
CDH1-210ENST00000566612 B3GNT5Q9BYG0 378 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 WWP1Q9H0M0 922 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 TJP2Q9UDY2 1190 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 ABT1Q9ULW3 272 aaKnown RBP12.03□□□□□ -0.48
CDH1-210ENST00000566612 PTPRJQ12913 1337 aa12.03□□□□□ -0.48
CDH1-210ENST00000566612 PABPN1LA6NDY0 278 aaKnown RBP12.02□□□□□ -0.48
CDH1-210ENST00000566612 AP1G2O75843 785 aa12.02□□□□□ -0.48
CDH1-210ENST00000566612 CSPG5O95196 566 aa12.02□□□□□ -0.48
CDH1-210ENST00000566612 FAM200BP0CF97 657 aa12.02□□□□□ -0.48
CDH1-210ENST00000566612 ACADSBP45954 432 aa12.02□□□□□ -0.48
CDH1-210ENST00000566612 LRRC38Q5VT99 294 aa12.02□□□□□ -0.48
CDH1-210ENST00000566612 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.02□□□□□ -0.48
CDH1-210ENST00000566612 SLC26A11Q86WA9 606 aa12.02□□□□□ -0.48
CDH1-210ENST00000566612 C1orf127Q8N9H9 656 aa12.02□□□□□ -0.48
CDH1-210ENST00000566612 OR6P1Q8NGX9 317 aa12.02□□□□□ -0.48
CDH1-210ENST00000566612 ATXN2LQ8WWM7 1075 aaKnown RBP12.02□□□□□ -0.48
CDH1-210ENST00000566612 FBXL18Q96ME1 805 aa12.02□□□□□ -0.48
CDH1-210ENST00000566612 EPAS1Q99814 870 aa12.02□□□□□ -0.48
CDH1-210ENST00000566612 NIFKQ9BYG3 293 aaKnown RBP12.02□□□□□ -0.48
CDH1-210ENST00000566612 C12orf65Q9H3J6 166 aaKnown RBP12.02□□□□□ -0.48
CDH1-210ENST00000566612 LRRC4CQ9HCJ2 640 aa12.02□□□□□ -0.48
CDH1-210ENST00000566612 SLC12A6Q9UHW9 1150 aa12.02□□□□□ -0.48
CDH1-210ENST00000566612 SMAPO00193 183 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 LRCH4O75427 683 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 RECQL4O94761 1208 aa12.02□□□□□ -0.49
CDH1-210ENST00000566612 B3GAT3O94766 335 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms