RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 OBP2AQ9NY56 170 aa27.54■■■□□ 2
NME3-209ENST00000566600 CHORDC1Q9UHD1 332 aaPredicted RBP27.54■■■□□ 2
NME3-209ENST00000566600 ZDHHC11BP0C7U3 371 aa27.53■■■□□ 2
NME3-209ENST00000566600 HDCP19113 662 aa27.53■■■□□ 2
NME3-209ENST00000566600 PSEN1P49768 467 aa27.53■■■□□ 2
NME3-209ENST00000566600 TKTL1P51854 596 aa27.53■■■□□ 2
NME3-209ENST00000566600 CCDC186Q7Z3E2 898 aa27.53■■■□□ 2
NME3-209ENST00000566600 KIF9Q9HAQ2 790 aa27.53■■■□□ 2
NME3-209ENST00000566600 ACP6Q9NPH0 428 aa27.53■■■□□ 2
NME3-209ENST00000566600 GMIPQ9P107 970 aa27.53■■■□□ 2
NME3-209ENST00000566600 PCDHGC3Q9UN70 934 aa27.53■■■□□ 2
NME3-209ENST00000566600 NUP210Q8TEM1 1887 aaPredicted RBP27.53■■■□□ 2
NME3-209ENST00000566600 PI4K2BG5E9Z4 385 aa27.52■■■□□ 2
NME3-209ENST00000566600 EPHB6O15197 1021 aa27.52■■■□□ 2
NME3-209ENST00000566600 CKMP06732 381 aa27.52■■■□□ 2
NME3-209ENST00000566600 TPM3P06753 285 aa27.52■■■□□ 2
NME3-209ENST00000566600 PNMA6AP0CW24 399 aaPredicted RBP27.52■■■□□ 2
NME3-209ENST00000566600 KRT9P35527 623 aa27.52■■■□□ 2
NME3-209ENST00000566600 STAT1P42224 750 aa27.52■■■□□ 2
NME3-209ENST00000566600 TUBP50607 506 aa27.52■■■□□ 2
NME3-209ENST00000566600 JAM2P57087 298 aa27.52■■■□□ 2
NME3-209ENST00000566600 ZNF268Q14587 947 aaPredicted RBP27.52■■■□□ 2
NME3-209ENST00000566600 CACNA2D4Q7Z3S7 1137 aa27.52■■■□□ 2
NME3-209ENST00000566600 SLC47A2Q86VL8 602 aa27.52■■■□□ 2
NME3-209ENST00000566600 ARHGAP18Q8N392 663 aa27.52■■■□□ 2
NME3-209ENST00000566600 CELF5Q8N6W0 485 aaKnown RBP27.52■■■□□ 2
NME3-209ENST00000566600 DEPDC1BQ8WUY9 529 aa27.52■■■□□ 2
NME3-209ENST00000566600 HSFY1Q96LI6 401 aa27.52■■■□□ 2
NME3-209ENST00000566600 RPP25Q9BUL9 199 aaKnown RBP27.52■■■□□ 2
NME3-209ENST00000566600 DUSP12Q9UNI6 340 aa27.52■■■□□ 2
NME3-209ENST00000566600 ANAPC1Q9H1A4 1944 aa27.51■■■□□ 2
NME3-209ENST00000566600 C2orf78A6NCI8 922 aa27.51■■□□□ 1.99
NME3-209ENST00000566600 TULP2O00295 520 aa27.51■■□□□ 1.99
NME3-209ENST00000566600 SOX5P35711 763 aa27.51■■□□□ 1.99
NME3-209ENST00000566600 VIPR2P41587 438 aa27.51■■□□□ 1.99
NME3-209ENST00000566600 GPD2P43304 727 aa27.51■■□□□ 1.99
NME3-209ENST00000566600 ZXDAP98168 799 aa27.51■■□□□ 1.99
NME3-209ENST00000566600 HECTD3Q5T447 861 aa27.51■■□□□ 1.99
NME3-209ENST00000566600 SIX6OS1Q8N1H7 587 aa27.51■■□□□ 1.99
NME3-209ENST00000566600 ST13P5Q8NFI4 369 aaPredicted RBP27.51■■□□□ 1.99
NME3-209ENST00000566600 STK32AQ8WU08 396 aa27.51■■□□□ 1.99
NME3-209ENST00000566600 TDP1Q9NUW8 608 aa27.51■■□□□ 1.99
NME3-209ENST00000566600 HEPACAM2A8MVW5 462 aa27.5■■□□□ 1.99
NME3-209ENST00000566600 ZBED1O96006 694 aa27.5■■□□□ 1.99
NME3-209ENST00000566600 OAS1P00973 400 aaKnown RBP27.5■■□□□ 1.99
NME3-209ENST00000566600 SRFP11831 508 aa27.5■■□□□ 1.99
NME3-209ENST00000566600 CYP11B1P15538 503 aa27.5■■□□□ 1.99
NME3-209ENST00000566600 PSMC3P17980 439 aa27.5■■□□□ 1.99
NME3-209ENST00000566600 PMF1Q6P1K2 205 aa27.5■■□□□ 1.99
NME3-209ENST00000566600 DENND1BQ6P3S1 775 aa27.5■■□□□ 1.99
NME3-209ENST00000566600 FMNL3Q8IVF7 1028 aa27.5■■□□□ 1.99
NME3-209ENST00000566600 MFSD6LQ8IWD5 586 aa27.5■■□□□ 1.99
NME3-209ENST00000566600 SCML4Q8N228 414 aa27.5■■□□□ 1.99
NME3-209ENST00000566600 ARL14EPQ8N8R7 260 aaPredicted RBP27.5■■□□□ 1.99
NME3-209ENST00000566600 RNF214Q8ND24 703 aa27.5■■□□□ 1.99
NME3-209ENST00000566600 EDAQ92838 391 aa27.5■■□□□ 1.99
NME3-209ENST00000566600 KHSRPQ92945 711 aaKnown RBP eCLIP27.5■■□□□ 1.99
NME3-209ENST00000566600 LHX5Q9H2C1 402 aa27.5■■□□□ 1.99
NME3-209ENST00000566600 PRAMEF12O95522 483 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 ACADSBP45954 432 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 ADIGQ0VDE8 80 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 PM20D1Q6GTS8 502 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 VITQ6UXI7 678 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 YAF2Q8IY57 180 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 USP13Q92995 863 aaPredicted RBP27.49■■□□□ 1.99
NME3-209ENST00000566600 CYP2S1Q96SQ9 504 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 ANP32EQ9BTT0 268 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 TRMT61BQ9BVS5 477 aaKnown RBP27.49■■□□□ 1.99
NME3-209ENST00000566600 PLA2G2FQ9BZM2 168 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 PDCL3Q9H2J4 239 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 CYLDQ9NQC7 956 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 CNGB3Q9NQW8 809 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 IFNKQ9P0W0 207 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 MYO6Q9UM54 1294 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 CEP83Q9Y592 693 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 MYO16Q9Y6X6 1858 aa27.49■■□□□ 1.99
NME3-209ENST00000566600 CBFA2T2O43439 604 aa27.48■■□□□ 1.99
NME3-209ENST00000566600 GFPT2O94808 682 aa27.48■■□□□ 1.99
NME3-209ENST00000566600 OLFM2O95897 454 aa27.48■■□□□ 1.99
NME3-209ENST00000566600 RGS7P49802 495 aa27.48■■□□□ 1.99
NME3-209ENST00000566600 SLC7A9P82251 487 aa27.48■■□□□ 1.99
NME3-209ENST00000566600 TADA2BQ86TJ2 420 aa27.48■■□□□ 1.99
NME3-209ENST00000566600 ZNF677Q86XU0 584 aa27.48■■□□□ 1.99
NME3-209ENST00000566600 NOX5Q96PH1 765 aa27.48■■□□□ 1.99
NME3-209ENST00000566600 SLC22A12Q96S37 553 aa27.48■■□□□ 1.99
NME3-209ENST00000566600 CDK5RAP1Q96SZ6 601 aaKnown RBP27.48■■□□□ 1.99
NME3-209ENST00000566600 ULBP1Q9BZM6 244 aa27.48■■□□□ 1.99
NME3-209ENST00000566600 SLC2A4RGQ9NR83 387 aa27.48■■□□□ 1.99
NME3-209ENST00000566600 CLIC5Q9NZA1 410 aa27.48■■□□□ 1.99
NME3-209ENST00000566600 NAGPAQ9UK23 515 aa27.48■■□□□ 1.99
NME3-209ENST00000566600 ARHGAP26Q9UNA1 814 aa27.48■■□□□ 1.99
NME3-209ENST00000566600 FBXO21O94952 628 aa27.47■■□□□ 1.99
NME3-209ENST00000566600 CCDC172P0C7W6 258 aa27.47■■□□□ 1.99
NME3-209ENST00000566600 RALAP11233 206 aa27.47■■□□□ 1.99
NME3-209ENST00000566600 RPL34P49207 117 aaKnown RBP27.47■■□□□ 1.99
NME3-209ENST00000566600 FCHO2Q0JRZ9 810 aa27.47■■□□□ 1.99
NME3-209ENST00000566600 GPIHBP1Q8IV16 184 aa27.47■■□□□ 1.99
NME3-209ENST00000566600 ZNF276Q8N554 614 aa27.47■■□□□ 1.99
NME3-209ENST00000566600 BPIFB1Q8TDL5 484 aa27.47■■□□□ 1.99
NME3-209ENST00000566600 RSPRY1Q96DX4 576 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms