RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 C4orf47A7E2U8 309 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 CLDN5O00501 218 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 KHNYNO15037 678 aaKnown RBP17.55■□□□□ 0.4
TSR3-202ENST00000566296 EXOC3O60645 756 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 KAT7O95251 611 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 KLF8O95600 359 aaPredicted RBP17.55■□□□□ 0.4
TSR3-202ENST00000566296 DHPSP49366 369 aaPredicted RBP17.55■□□□□ 0.4
TSR3-202ENST00000566296 NOVA1P51513 510 aaKnown RBP17.55■□□□□ 0.4
TSR3-202ENST00000566296 CACNA2D1P54289 1103 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 MYL6P60660 151 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 KDSRQ06136 332 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 ZNF699Q32M78 642 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 EOGTQ5NDL2 527 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 C12orf56Q8IXR9 622 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 ALLCQ8N6M5 410 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 TXNDC5Q8NBS9 432 aaKnown RBP17.55■□□□□ 0.4
TSR3-202ENST00000566296 WHAMMQ8TF30 809 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 MED10Q9BTT4 135 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 B3GNT5Q9BYG0 378 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 ARHGEF4Q9NR80 690 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 BCCIPQ9P287 314 aaKnown RBP eCLIP17.55■□□□□ 0.4
TSR3-202ENST00000566296 ZDHHC9Q9Y397 364 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 SH3BP1Q9Y3L3 701 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 ATP6V1DQ9Y5K8 247 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 USP24Q9UPU5 2620 aa17.55■□□□□ 0.4
TSR3-202ENST00000566296 GON4LQ3T8J9 2241 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 BCKDHBP21953 392 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 TIE1P35590 1138 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 BMT2Q1RMZ1 405 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 ZNF667Q5HYK9 610 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 FOXD4L5Q5VV16 416 aaPredicted RBP17.54■□□□□ 0.4
TSR3-202ENST00000566296 SHC4Q6S5L8 630 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 FAM35AQ86V20 835 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 C12orf40Q86WS4 652 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 ADGRG2Q8IZP9 1017 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 GOLGA5Q8TBA6 731 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 FOXD4L4Q8WXT5 416 aaPredicted RBP17.54■□□□□ 0.4
TSR3-202ENST00000566296 OTUB2Q96DC9 234 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 SMARCD1Q96GM5 515 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 TNIP3Q96KP6 325 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 BLZF1Q9H2G9 400 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 SMYD3Q9H7B4 428 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 DMAP1Q9NPF5 467 aaPredicted RBP17.54■□□□□ 0.4
TSR3-202ENST00000566296 TMEM9BQ9NQ34 198 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 TMEM30AQ9NV96 361 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 FAM13BQ9NYF5 915 aa17.54■□□□□ 0.4
TSR3-202ENST00000566296 TFIP11Q9UBB9 837 aaKnown RBP17.54■□□□□ 0.4
TSR3-202ENST00000566296 E2F8A0AVK6 867 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 POLR2DO15514 142 aaKnown RBP17.53■□□□□ 0.4
TSR3-202ENST00000566296 GRIA2P42262 883 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 SLC6A11P48066 632 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 AP3M2P53677 418 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 SLC5A3P53794 718 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 GAD2Q05329 585 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 EHHADHQ08426 723 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 PREPLQ4J6C6 727 aaPredicted RBP17.53■□□□□ 0.4
TSR3-202ENST00000566296 HECTD3Q5T447 861 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 BTBD8Q5XKL5 378 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 RHBDF2Q6PJF5 856 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 TMEM92Q6UXU6 159 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 SCARA5Q6ZMJ2 495 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 IL17RCQ8NAC3 791 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 NACA2Q9H009 215 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 XYLT2Q9H1B5 865 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 VRTNQ9H8Y1 702 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 SLC39A2Q9NP94 309 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 PI4KAP42356 2102 aa17.53■□□□□ 0.4
TSR3-202ENST00000566296 PVALEFA0A1B0GWK0 134 aa17.52■□□□□ 0.4
TSR3-202ENST00000566296 SGK1O00141 431 aa17.52■□□□□ 0.4
TSR3-202ENST00000566296 COCHO43405 550 aa17.52■□□□□ 0.4
TSR3-202ENST00000566296 CASP4P49662 377 aa17.52■□□□□ 0.4
TSR3-202ENST00000566296 TUBP50607 506 aa17.52■□□□□ 0.4
TSR3-202ENST00000566296 ZNF252P-AS1Q0IIN9 211 aa17.52■□□□□ 0.4
TSR3-202ENST00000566296 BYSLQ13895 437 aaKnown RBP17.52■□□□□ 0.4
TSR3-202ENST00000566296 KNOP1Q1ED39 458 aaKnown RBP17.52■□□□□ 0.4
TSR3-202ENST00000566296 LY6G5CQ5SRR4 150 aa17.52■□□□□ 0.4
TSR3-202ENST00000566296 ATL3Q6DD88 541 aa17.52■□□□□ 0.4
TSR3-202ENST00000566296 LPCAT2Q7L5N7 544 aa17.52■□□□□ 0.4
TSR3-202ENST00000566296 OLIG1Q8TAK6 271 aa17.52■□□□□ 0.4
TSR3-202ENST00000566296 ZNF516Q92618 1163 aa17.52■□□□□ 0.4
TSR3-202ENST00000566296 PIGKQ92643 395 aa17.52■□□□□ 0.4
TSR3-202ENST00000566296 KRT82Q9NSB4 513 aa17.52■□□□□ 0.4
TSR3-202ENST00000566296 PLXND1Q9Y4D7 1925 aa17.52■□□□□ 0.4
TSR3-202ENST00000566296 ASCC3Q8N3C0 2202 aaKnown RBP17.51■□□□□ 0.39
TSR3-202ENST00000566296 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.51■□□□□ 0.39
TSR3-202ENST00000566296 TCRBV21S2A2A0A5A6 115 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 ANTXRLA6NF34 631 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 MAP3K13O43283 966 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 AP1G2O75843 785 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 P4HA1P13674 534 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 HNRNPLP14866 589 aaKnown RBP eCLIP17.51■□□□□ 0.39
TSR3-202ENST00000566296 CASP1P29466 404 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 P2RY2P41231 377 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 DPP6P42658 865 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 TNFRSF4P43489 277 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 NCOA4Q13772 614 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 NUDT18Q6ZVK8 323 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 TRMT11Q7Z4G4 463 aaKnown RBP17.51■□□□□ 0.39
TSR3-202ENST00000566296 SFTPA1Q8IWL2 248 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 PGBD3Q8N328 593 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms