RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 CCL16O15467 120 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 RTN3O95197 1032 aaPredicted RBP13.29□□□□□ -0.28
SF3B3-206ENST00000565990 CCDC175P0C221 793 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 ZDHHC11BP0C7U3 371 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 SSTR3P32745 418 aaPredicted RBP13.29□□□□□ -0.28
SF3B3-206ENST00000565990 GABRB2P47870 512 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 USP46P62068 366 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 NOMO3P69849 1222 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 MTMR3Q13615 1198 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 VEPH1Q14D04 833 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 TSR1Q2NL82 804 aaKnown RBP13.29□□□□□ -0.28
SF3B3-206ENST00000565990 ATAT1Q5SQI0 421 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 TAF3Q5VWG9 929 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 SNX30Q5VWJ9 437 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 TMC8Q8IU68 726 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 SMRP1Q8NCR6 262 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 MNS1Q8NEH6 495 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 SCAMP5Q8TAC9 235 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 SUSD6Q92537 303 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 HLA-CQ95604 372 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 CHP1Q99653 195 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 FBXO44Q9H4M3 255 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 IL21Q9HBE4 155 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 ZNHIT6Q9NWK9 470 aaKnown RBP13.29□□□□□ -0.28
SF3B3-206ENST00000565990 NCANO14594 1321 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 XIRP2A4UGR9 3374 aa13.29□□□□□ -0.28
SF3B3-206ENST00000565990 PRUNE2Q8WUY3 3088 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 SOBPA7XYQ1 873 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 DDX3XO00571 662 aaKnown RBP eCLIP13.28□□□□□ -0.28
SF3B3-206ENST00000565990 TADA3O75528 432 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 FGF19O95750 216 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 F11P03951 625 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 PLEKP08567 350 aaPredicted RBP13.28□□□□□ -0.28
SF3B3-206ENST00000565990 YWHAQP27348 245 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 ACADSBP45954 432 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 PPP3CCP48454 512 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 SLC5A3P53794 718 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 CENPCQ03188 943 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 PDCLQ13371 301 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 CLEC16AQ2KHT3 1053 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 LEXMQ3ZCV2 418 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 PRSS36Q5K4E3 855 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 RARS2Q5T160 578 aaKnown RBP13.28□□□□□ -0.28
SF3B3-206ENST00000565990 CES5AQ6NT32 575 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 GPRIN1Q7Z2K8 1008 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 TMEM150AQ86TG1 271 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 PHF13Q86YI8 300 aaPredicted RBP13.28□□□□□ -0.28
SF3B3-206ENST00000565990 ELMOD1Q8N336 334 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 ZNF276Q8N554 614 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 GPR161Q8N6U8 529 aaKnown RBP13.28□□□□□ -0.28
SF3B3-206ENST00000565990 MAFAQ8NHW3 353 aaPredicted RBP13.28□□□□□ -0.28
SF3B3-206ENST00000565990 PPM1EQ8WY54 764 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 OVCA2Q8WZ82 227 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 SMG7Q92540 1137 aaKnown RBP13.28□□□□□ -0.28
SF3B3-206ENST00000565990 UBXN4Q92575 508 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 UBE2ZQ9H832 354 aaPredicted RBP13.28□□□□□ -0.28
SF3B3-206ENST00000565990 WDR6Q9NNW5 1121 aaKnown RBP13.28□□□□□ -0.28
SF3B3-206ENST00000565990 CNGB3Q9NQW8 809 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 HCFC1R1Q9NWW0 138 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 CD207Q9UJ71 328 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 NENFQ9UMX5 172 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 SCML2Q9UQR0 700 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 CEP83Q9Y592 693 aa13.28□□□□□ -0.28
SF3B3-206ENST00000565990 MOSPD3O75425 235 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 RHOP08100 348 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 MMP8P22894 467 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 CASQ1P31415 396 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 EIF4A3P38919 411 aaKnown RBP13.27□□□□□ -0.29
SF3B3-206ENST00000565990 MTHFRP42898 656 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 TKTL1P51854 596 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 SNX16P57768 344 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 TAF10Q12962 218 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 PTP4A2Q12974 167 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 PABPC1LQ4VXU2 614 aaKnown RBP13.27□□□□□ -0.29
SF3B3-206ENST00000565990 CYP4A22Q5TCH4 519 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 ACAD10Q6JQN1 1059 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 PPP1R2P3Q6NXS1 205 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 GAREM2Q75VX8 874 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 BHLHA9Q7RTU4 235 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 GRASPQ7Z6J2 395 aaPredicted RBP13.27□□□□□ -0.29
SF3B3-206ENST00000565990 MON1AQ86VX9 555 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 TMTC1Q8IUR5 882 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 GPIHBP1Q8IV16 184 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 PASD1Q8IV76 773 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 SCUBE3Q8IX30 993 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 HS6ST3Q8IZP7 471 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 C1orf131Q8NDD1 294 aaKnown RBP13.27□□□□□ -0.29
SF3B3-206ENST00000565990 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.27□□□□□ -0.29
SF3B3-206ENST00000565990 CPA5Q8WXQ8 436 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 VCPIP1Q96JH7 1222 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 NECTIN4Q96NY8 510 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 NOX5Q96PH1 765 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 CPXM1Q96SM3 734 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 CORO1BQ9BR76 489 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 ISCUQ9H1K1 167 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 ZNF334Q9HCZ1 680 aaPredicted RBP13.27□□□□□ -0.29
SF3B3-206ENST00000565990 UXTQ9UBK9 157 aaPredicted RBP13.27□□□□□ -0.29
SF3B3-206ENST00000565990 ADAMTS1Q9UHI8 967 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 DENND4AQ7Z401 1863 aa13.27□□□□□ -0.29
SF3B3-206ENST00000565990 A0A087X0T9 212 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms