RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SGMS1Q86VZ5 419 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 FAM186BQ8IYM0 893 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 KRT78Q8N1N4 520 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 MDGA1Q8NFP4 955 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 ERO1AQ96HE7 468 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 PNNQ9H307 717 aaKnown RBP4.87□□□□□ -1.63
LINC00561-201ENST00000565815 KIAA1586Q9HCI6 787 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 TBC1D23Q9NUY8 699 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 JKAMPQ9P055 326 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 HDAC5Q9UQL6 1122 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 MED16Q9Y2X0 877 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 ATP6V0A2Q9Y487 856 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 RAD17O75943 681 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 RPLP2P05387 115 aaKnown RBP4.87□□□□□ -1.63
LINC00561-201ENST00000565815 EN2P19622 333 aaPredicted RBP4.87□□□□□ -1.63
LINC00561-201ENST00000565815 GMPSP49915 693 aaPredicted RBP4.87□□□□□ -1.63
LINC00561-201ENST00000565815 PPP1R42Q7Z4L9 355 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 USP37Q86T82 979 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 TNIP3Q96KP6 325 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 ADOQ96SZ5 270 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 EYA3Q99504 573 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 GLIS2Q9BZE0 524 aaPredicted RBP4.87□□□□□ -1.63
LINC00561-201ENST00000565815 NLRC4Q9NPP4 1024 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 PLCB1Q9NQ66 1216 aa4.87□□□□□ -1.63
LINC00561-201ENST00000565815 NIP7Q9Y221 180 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC00561-201ENST00000565815 DDX60Q8IY21 1712 aaKnown RBP4.87□□□□□ -1.63
LINC00561-201ENST00000565815 LOC102724159A0A0B4J2E5 919 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 AHRRA9YTQ3 701 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 PRR5-ARHGAP8B1AHC4 643 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 GNAI3P08754 354 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 RARBP10826 455 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 PIM1P11309 404 aaPredicted RBP4.86□□□□□ -1.63
LINC00561-201ENST00000565815 NF2P35240 595 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 RARSP54136 660 aaKnown RBP4.86□□□□□ -1.63
LINC00561-201ENST00000565815 PRMT2P55345 433 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 GNAI1P63096 354 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 OCA2Q04671 838 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 CXCL9Q07325 125 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 HDAC1Q13547 482 aaPredicted RBP4.86□□□□□ -1.63
LINC00561-201ENST00000565815 PWP2Q15269 919 aaKnown RBP4.86□□□□□ -1.63
LINC00561-201ENST00000565815 CD300EQ496F6 205 aaPredicted RBP4.86□□□□□ -1.63
LINC00561-201ENST00000565815 SLC10A5Q5PT55 438 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 FAM83BQ5T0W9 1011 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 EFCAB12Q6NXP0 572 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 UNC13DQ70J99 1090 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 CIR1Q86X95 450 aaPredicted RBP4.86□□□□□ -1.63
LINC00561-201ENST00000565815 SEC61A2Q9H9S3 476 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 CNOT7Q9UIV1 285 aaKnown RBP4.86□□□□□ -1.63
LINC00561-201ENST00000565815 SORCS3Q9UPU3 1222 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 H7C4K7 107 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 FRAT2O75474 233 aaPredicted RBP4.86□□□□□ -1.63
LINC00561-201ENST00000565815 NCR1O76036 304 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 POMCP01189 267 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 GRPP07492 148 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 ZFP36P26651 326 aaKnown RBP4.86□□□□□ -1.63
LINC00561-201ENST00000565815 RRP1BQ14684 758 aaKnown RBP4.86□□□□□ -1.63
LINC00561-201ENST00000565815 KCNAB1Q14722 419 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 FAM83AQ86UY5 434 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 SAMD3Q8N6K7 520 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 OR56A1Q8NGH5 318 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 MYD88Q99836 296 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 GPR87Q9BY21 358 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 VPS11Q9H270 941 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 CD248Q9HCU0 757 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 CHMP5Q9NZZ3 219 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 SLC30A1Q9Y6M5 507 aa4.86□□□□□ -1.63
LINC00561-201ENST00000565815 MANSC4A6NHS7 340 aaPredicted RBP4.85□□□□□ -1.63
LINC00561-201ENST00000565815 LMNAP02545 664 aaKnown RBP4.85□□□□□ -1.63
LINC00561-201ENST00000565815 PARP1P09874 1014 aaKnown RBP4.85□□□□□ -1.63
LINC00561-201ENST00000565815 HOXA5P20719 270 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 COMTP21964 271 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 HIBADHP31937 336 aaKnown RBP4.85□□□□□ -1.63
LINC00561-201ENST00000565815 MAPK10P53779 464 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 PTH1RQ03431 593 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 DOK3Q7L591 496 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 RASAL3Q86YV0 1011 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 CFAP52Q8N1V2 620 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 NUP62CLQ9H1M0 184 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 AFF4Q9UHB7 1163 aaKnown RBP4.85□□□□□ -1.63
LINC00561-201ENST00000565815 PCDHGB3Q9Y5G1 929 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 ABHD14A-ACY1A0A1B0GW23 586 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 FAM234BA2RU67 622 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 NR4A1P22736 598 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 CHAF1AQ13111 956 aaPredicted RBP4.85□□□□□ -1.63
LINC00561-201ENST00000565815 SLC39A6Q13433 755 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 MVPQ14764 893 aaKnown RBP4.85□□□□□ -1.63
LINC00561-201ENST00000565815 ARHGAP15Q53QZ3 475 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 HSP90AB3PQ58FF7 597 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 ZKSCAN2Q63HK3 967 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 KIF6Q6ZMV9 814 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 ZSCAN18Q8TBC5 510 aaPredicted RBP4.85□□□□□ -1.63
LINC00561-201ENST00000565815 UBE2Q2Q8WVN8 375 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 SNX21Q969T3 373 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 MNTQ99583 582 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 JAG2Q9Y219 1238 aa4.85□□□□□ -1.63
LINC00561-201ENST00000565815 SIPA1L3O60292 1781 aaPredicted RBP4.85□□□□□ -1.63
LINC00561-201ENST00000565815 COL1A1P02452 1464 aaPredicted RBP4.85□□□□□ -1.63
LINC00561-201ENST00000565815 FSD2A1L4K1 749 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 UNC119BA6NIH7 251 aa4.84□□□□□ -1.63
LINC00561-201ENST00000565815 GRXCR1A8MXD5 290 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms