RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 DNM3Q9UQ16 869 aa9.69□□□□□ -0.86
VPS9D1-205ENST00000565452 TRIP11Q15643 1979 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 A0A1B0GVT2 93 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 DFNA5O60443 496 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 HIP1RO75146 1068 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 TULP3O75386 442 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 CCT6AP40227 531 aaKnown RBP9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 ZXDBP98169 803 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 STK3Q13188 491 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 ENOX2Q16206 610 aaKnown RBP9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 KIF19Q2TAC6 998 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 LY6G5CQ5SRR4 150 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 ARHGAP40Q5TG30 622 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 HAUS3Q68CZ6 603 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 JADE1Q6IE81 842 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 PRICKLE2Q7Z3G6 844 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 SPATA2LQ8IUW3 424 aaPredicted RBP9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 SCN4BQ8IWT1 228 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 PHTF2Q8N3S3 785 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 ZNF248Q8NDW4 579 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 SPIRE2Q8WWL2 714 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 BICD1Q96G01 975 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 LGMNQ99538 433 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 NUP58Q9BVL2 599 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 FAM117AQ9C073 453 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 CCSER1Q9C0I3 900 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 RNF38Q9H0F5 515 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 GJB4Q9NTQ9 266 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 CFAP97Q9P2B7 532 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 EIF2B4Q9UI10 523 aaKnown RBP9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 KIAA1024Q9UPX6 916 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 DERAQ9Y315 318 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 HEMK1Q9Y5R4 338 aaPredicted RBP9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 CPQQ9Y646 472 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 MGAQ8IWI9 3026 aa9.68□□□□□ -0.86
VPS9D1-205ENST00000565452 E2F8A0AVK6 867 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 SFI1A8K8P3 1242 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 KPNA7A9QM74 516 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 GFRA2O00451 464 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 ENC1O14682 589 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 OGTO15294 1046 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 BRINP1O60477 761 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 LDOC1O95751 146 aaPredicted RBP9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 ABL1P00519 1130 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 MYL7Q01449 175 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 PDIA5Q14554 519 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 TMEM132DQ14C87 1099 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 TBC1D25Q3MII6 688 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 SV2CQ496J9 727 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 ETFBKMTQ8IXQ9 262 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 DAW1Q8N136 415 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 TERB1Q8NA31 727 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 SCFD1Q8WVM8 642 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 IGSF8Q969P0 613 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 FUBP3Q96I24 572 aaKnown RBP eCLIP9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 CEP295NLQ96MC4 621 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 GABRG3Q99928 467 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 LLPHQ9BRT6 129 aaKnown RBP9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 TIPINQ9BVW5 301 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 TMEM60Q9H2L4 133 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 CD248Q9HCU0 757 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 SMPD4Q9NXE4 827 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 DPP3Q9NY33 737 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 GTF3C4Q9UKN8 822 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 ANKRD6Q9Y2G4 727 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 SNX11Q9Y5W9 270 aa9.67□□□□□ -0.86
VPS9D1-205ENST00000565452 TEX15Q9BXT5 2789 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 TNRC6BQ9UPQ9 1833 aaKnown RBP9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 ZNF840PA6NDX5 716 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 H0YCG3 227 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 KCNK3O14649 394 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 HOXC11O43248 304 aaPredicted RBP9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 RFPL3O75679 317 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 MCM7P33993 719 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 CCT8P50990 548 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 ZNF132P52740 706 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 STARD3Q14849 445 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 ME3Q16798 604 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 ANO4Q32M45 955 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 CFAP221Q4G0U5 840 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 EGFLAMQ63HQ2 1017 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 GRAMD4Q6IC98 578 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 ZNF574Q6ZN55 896 aaPredicted RBP9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 USP49Q70CQ1 688 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 MIB1Q86YT6 1006 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 CACTIN-AS1Q8N1I8 211 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 TMEM161BQ8NDZ6 487 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 C1orf216Q8TAB5 229 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 TNFRSF25Q93038 417 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 SNX21Q969T3 373 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 ERLEC1Q96DZ1 483 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 SPATA17Q96L03 361 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 XPO6Q96QU8 1125 aaKnown RBP9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 ACOX2Q99424 681 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 HAPLN2Q9GZV7 340 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 PCED1AQ9H1Q7 454 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 SLC6A17Q9H1V8 727 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 ASB7Q9H672 318 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 DDX19AQ9NUU7 478 aaKnown RBP9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 MAGEC2Q9UBF1 373 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms