RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 TMEM39AQ9NV64 488 aa20.49■□□□□ 0.87
CLN6-205ENST00000564846 C3orf70A6NLC5 250 aaPredicted RBP20.48■□□□□ 0.87
CLN6-205ENST00000564846 SYN3O14994 580 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 OAZ2O95190 189 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 RFC2P35250 354 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 TKTL1P51854 596 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 ATP11AP98196 1134 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 CDO1Q16878 200 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 BOLA3Q53S33 107 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 KCNT1Q5JUK3 1230 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 SH3PXD2AQ5TCZ1 1133 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 DEFB128Q7Z7B8 93 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 FAM172AQ8WUF8 416 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 C1orf54Q8WWF1 131 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 ACSF2Q96CM8 615 aaPredicted RBP20.48■□□□□ 0.87
CLN6-205ENST00000564846 ERP44Q9BS26 406 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 C11orf84Q9BUA3 381 aaPredicted RBP20.48■□□□□ 0.87
CLN6-205ENST00000564846 DDX23Q9BUQ8 820 aaKnown RBP20.48■□□□□ 0.87
CLN6-205ENST00000564846 COLEC11Q9BWP8 271 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 DCLK3Q9C098 648 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 C11orf49Q9H6J7 331 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 NGRNQ9NPE2 291 aaKnown RBP20.48■□□□□ 0.87
CLN6-205ENST00000564846 FAM114A2Q9NRY5 505 aa20.48■□□□□ 0.87
CLN6-205ENST00000564846 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.48■□□□□ 0.87
CLN6-205ENST00000564846 MAP2K7O14733 419 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 NRP1O14786 923 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 ALDH2P05091 517 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 CLTBP09497 229 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 KRT10P13645 584 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 KDELR1P24390 212 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 MATKP42679 507 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 TAZQ16635 292 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 RAB41Q5JT25 222 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 KCTD6Q8NC69 237 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 ZMIZ2Q8NF64 920 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 CENPIQ92674 756 aaPredicted RBP20.47■□□□□ 0.87
CLN6-205ENST00000564846 PEBP4Q96S96 227 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 TBCBQ99426 244 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 CNGB3Q9NQW8 809 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 ADAM28Q9UKQ2 775 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 NFU1Q9UMS0 254 aa20.47■□□□□ 0.87
CLN6-205ENST00000564846 DAB1O75553 588 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 SASH3O75995 380 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 ECEL1O95672 775 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 DRG2P55039 364 aaKnown RBP20.46■□□□□ 0.87
CLN6-205ENST00000564846 YWHAZP63104 245 aaKnown RBP20.46■□□□□ 0.87
CLN6-205ENST00000564846 NNTQ13423 1086 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 IKBKEQ14164 716 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 CASP8Q14790 479 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 KAZNQ674X7 775 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 CNKSR3Q6P9H4 555 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 C4orf50Q6ZRC1 276 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 GRK7Q8WTQ7 553 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 CAVIN3Q969G5 261 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 KCNK16Q96T55 309 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 TMEM175Q9BSA9 504 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 TRIM51Q9BSJ1 452 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 PNPLA8Q9NP80 782 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 CHST7Q9NS84 486 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 TNNT3P45378 269 aaPredicted RBP20.46■□□□□ 0.87
CLN6-205ENST00000564846 GATMP50440 423 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 HDAC4P56524 1084 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 TRADDQ15628 312 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 DUPD1Q68J44 220 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 SYDE1Q6ZW31 735 aaPredicted RBP20.46■□□□□ 0.87
CLN6-205ENST00000564846 CYP4V2Q6ZWL3 525 aaPredicted RBP20.46■□□□□ 0.87
CLN6-205ENST00000564846 LRRTM3Q86VH5 581 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 TEKT4Q8WW24 435 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 HSPH1Q92598 858 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 FAM149B1Q96BN6 582 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 DMAP1Q9NPF5 467 aaPredicted RBP20.46■□□□□ 0.87
CLN6-205ENST00000564846 TMLHEQ9NVH6 421 aa20.46■□□□□ 0.87
CLN6-205ENST00000564846 R3HDM2Q9Y2K5 976 aaKnown RBP20.46■□□□□ 0.87
CLN6-205ENST00000564846 TTC3P53804 2025 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 TBKBP1A7MCY6 615 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 HHLA1C9JL84 531 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 DAPK3O43293 454 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 CAPN2P17655 700 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 BDNFP23560 247 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 GBP1P32455 592 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 KCNJ1P48048 391 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 NDUFV1P49821 464 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 CACNA2D1P54289 1103 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 HLTFQ14527 1009 aaKnown RBP eCLIP20.45■□□□□ 0.86
CLN6-205ENST00000564846 SCYL2Q6P3W7 929 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 STRADAQ7RTN6 431 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 MAP7D3Q8IWC1 876 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 ATL2Q8NHH9 583 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 ATG4AQ8WYN0 398 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 TMEM209Q96SK2 561 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 ULBP1Q9BZM6 244 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 TMEM30AQ9NV96 361 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 FAN1Q9Y2M0 1017 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 TET1Q8NFU7 2136 aa20.45■□□□□ 0.86
CLN6-205ENST00000564846 ENDOD1O94919 500 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 NOS2P35228 1153 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 SLC11A1P49279 550 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 CDR1P51861 262 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 DAOAP59103 153 aa20.44■□□□□ 0.86
CLN6-205ENST00000564846 ADCY2Q08462 1091 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms