RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 KCNJ11Q14654 390 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 PRKD1Q15139 912 aaPredicted RBP16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 C1orf228Q6PIY5 440 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 FAF2Q96CS3 445 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 ADPGKQ9BRR6 497 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 MINDY3Q9H8M7 445 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 BTBD7Q9P203 1132 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 M0QYV0 167 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 SMAPO00193 183 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 NFKBIEO00221 500 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 CSDE1O75534 798 aaKnown RBP16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 HAUS5O94927 633 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 STIP1P31948 543 aaKnown RBP16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 PTDSS1P48651 473 aaKnown RBP16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 SLC18A2Q05940 514 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 NOMO1Q15155 1222 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 CDO1Q16878 200 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 C15orf59Q2T9L4 293 aaPredicted RBP16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 KHDC1Q4VXA5 237 aaKnown RBP16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 TRNP1Q6NT89 227 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 METTL7BQ6UX53 244 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 DSTYKQ6XUX3 929 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 C4orf50Q6ZRC1 276 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 CDHR3Q6ZTQ4 885 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 LRRN4Q8WUT4 740 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 PTCD3Q96EY7 689 aaKnown RBP16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 CFAP36Q96G28 342 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 APOPT1Q96IL0 206 aa16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 PIWIL1Q96J94 861 aaKnown RBP16.14■□□□□ 0.17
GTF3C1-205ENST00000564747 PCNTO95613 3336 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 H7C0C1 242 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 ACKR2O00590 384 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 CCDC22O60826 627 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 GRAP2O75791 330 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 ARIH2O95376 493 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 MAP3K6O95382 1288 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 ITGB3P05106 788 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 DLDP09622 509 aaKnown RBP16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 TSHRP16473 764 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 GPD2P43304 727 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 ATP5OP48047 213 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 ZBTB16Q05516 673 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 TREML2Q5T2D2 321 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 CYP4V2Q6ZWL3 525 aaPredicted RBP16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 TTC7BQ86TV6 843 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 BTBD10Q9BSF8 475 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 R3HDMLQ9H3Y0 253 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 RAB6BQ9NRW1 208 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 ASNSD1Q9NWL6 643 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 IQCF3P0C7M6 154 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 GABRB2P47870 512 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 FAXCQ5TGI0 409 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 CHSY1Q86X52 802 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 TMEM176AQ96HP8 235 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 NSL1Q96IY1 281 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 LBHD1Q9BQE6 289 aaPredicted RBP16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 CDT1Q9H211 546 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 FZD8Q9H461 694 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 RPF1Q9H9Y2 349 aaKnown RBP16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 USP29Q9HBJ7 922 aa16.13■□□□□ 0.17
GTF3C1-205ENST00000564747 TNS1Q9HBL0 1735 aaKnown RBP16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 IGKV6-21A0A0C4DH24 114 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 E7ENQ6 273 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 CILPO75339 1184 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 ENDOD1O94919 500 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 EDNRBP24530 442 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 ZNF143P52747 638 aaPredicted RBP16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 CDK16Q00536 496 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 APBB1IPQ7Z5R6 666 aaPredicted RBP16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 CTAGE3PQ8IX95 158 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 PPM1NQ8N819 430 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 SKA1Q96BD8 255 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 HEXIM2Q96MH2 286 aaKnown RBP16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 LACTBL1A8MY62 500 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 CXorf49A8MYA2 514 aaPredicted RBP16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 E5RJQ4 531 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 KIF3CO14782 793 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 GSC2O15499 205 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 SERPINB4P48594 390 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 NCAPG2Q86XI2 1143 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 RXFP2Q8WXD0 754 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 FAM167AQ96KS9 214 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 OSBPL1AQ9BXW6 950 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 C2orf40Q9H1Z8 148 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 CNTN3Q9P232 1028 aa16.12■□□□□ 0.17
GTF3C1-205ENST00000564747 FAM237BA0A1B0GVD1 139 aa16.11■□□□□ 0.17
GTF3C1-205ENST00000564747 TRIM49D1C9J1S8 452 aa16.11■□□□□ 0.17
GTF3C1-205ENST00000564747 GPR25O00155 361 aa16.11■□□□□ 0.17
GTF3C1-205ENST00000564747 KCNN4O15554 427 aa16.11■□□□□ 0.17
GTF3C1-205ENST00000564747 HNRNPCL1O60812 293 aaKnown RBP16.11■□□□□ 0.17
GTF3C1-205ENST00000564747 C1QAP02745 245 aa16.11■□□□□ 0.17
GTF3C1-205ENST00000564747 MYL2P10916 166 aa16.11■□□□□ 0.17
GTF3C1-205ENST00000564747 PDGFRAP16234 1089 aa16.11■□□□□ 0.17
GTF3C1-205ENST00000564747 PCK1P35558 622 aa16.11■□□□□ 0.17
GTF3C1-205ENST00000564747 CLCN3P51790 818 aa16.11■□□□□ 0.17
GTF3C1-205ENST00000564747 ACAP1Q15027 740 aa16.11■□□□□ 0.17
GTF3C1-205ENST00000564747 MAP1SQ66K74 1059 aaPredicted RBP16.11■□□□□ 0.17
GTF3C1-205ENST00000564747 JADE1Q6IE81 842 aa16.11■□□□□ 0.17
GTF3C1-205ENST00000564747 LBX2Q6XYB7 198 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms