RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 FDXACB1Q9BRP7 624 aaPredicted RBP15.92■□□□□ 0.14
HERC2-207ENST00000564734 VPS11Q9H270 941 aa15.92■□□□□ 0.14
HERC2-207ENST00000564734 GBA2Q9HCG7 927 aaPredicted RBP15.92■□□□□ 0.14
HERC2-207ENST00000564734 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.92■□□□□ 0.14
HERC2-207ENST00000564734 KANSL3Q9P2N6 904 aa15.92■□□□□ 0.14
HERC2-207ENST00000564734 SLC17A7Q9P2U7 560 aa15.92■□□□□ 0.14
HERC2-207ENST00000564734 CHMP2BQ9UQN3 213 aa15.92■□□□□ 0.14
HERC2-207ENST00000564734 ZSWIM8A7E2V4 1837 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 DHRS4L1P0CG22 281 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 INSRRP14616 1297 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 CCND1P24385 295 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 NDST1P52848 882 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 CDH6P55285 790 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 MTM1Q13496 603 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 FAM47CQ5HY64 1035 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 DARS2Q6PI48 645 aaKnown RBP15.91■□□□□ 0.14
HERC2-207ENST00000564734 RTP4Q96DX8 246 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 OTUD5Q96G74 571 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 CPB2Q96IY4 423 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 RNF157Q96PX1 679 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 ERAP1Q9NZ08 941 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 STK38LQ9Y2H1 464 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 CXCL11O14625 94 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 WFS1O76024 890 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 C15orf59Q2T9L4 293 aaPredicted RBP15.91■□□□□ 0.14
HERC2-207ENST00000564734 PLEKHG4Q58EX7 1191 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 ZNF398Q8TD17 642 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 SLC44A1Q8WWI5 657 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 SLC7A6OSQ96CW6 309 aaPredicted RBP15.91■□□□□ 0.14
HERC2-207ENST00000564734 TMEM237Q96Q45 408 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 CYTH2Q99418 400 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 C12orf65Q9H3J6 166 aaKnown RBP15.91■□□□□ 0.14
HERC2-207ENST00000564734 FAM124BQ9H5Z6 455 aaPredicted RBP15.91■□□□□ 0.14
HERC2-207ENST00000564734 PNPLA8Q9NP80 782 aa15.91■□□□□ 0.14
HERC2-207ENST00000564734 TCRBV9S1A1TA0A576 114 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 E5RJQ4 531 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 C2CD2LO14523 706 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 DPYSL4O14531 572 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 CHADO15335 359 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 P4HA1P13674 534 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 ARF4P18085 180 aaPredicted RBP15.9■□□□□ 0.14
HERC2-207ENST00000564734 NEK3P51956 506 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 SLC18A2Q05940 514 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 KCTD2Q14681 263 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 CCDC14Q49A88 953 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 USP50Q70EL3 339 aaPredicted RBP15.9■□□□□ 0.14
HERC2-207ENST00000564734 INPP5DQ92835 1189 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 CLMNQ96JQ2 1002 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 PDGFRAP16234 1089 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 ALDH3A1P30838 453 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 ARHGAP1Q07960 439 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 TFDP2Q14188 446 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 TMEM132DQ14C87 1099 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 SLC45A4Q5BKX6 768 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 ZC3H18Q86VM9 953 aaKnown RBP15.9■□□□□ 0.14
HERC2-207ENST00000564734 VSIG1Q86XK7 387 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 PLD5Q8N7P1 536 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 USP6NLQ92738 828 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 SERAC1Q96JX3 654 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 TSPAN16Q9UKR8 245 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 ITGA11Q9UKX5 1188 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 KIAA1257Q9ULG3 409 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 KCNH4Q9UQ05 1017 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 NUMBLQ9Y6R0 609 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 GBP2P32456 591 aaPredicted RBP15.9■□□□□ 0.14
HERC2-207ENST00000564734 ETV4P43268 484 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 TTLL4Q14679 1199 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 PKDCCQ504Y2 493 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 ERO1BQ86YB8 467 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 PQLC3Q8N755 202 aa15.9■□□□□ 0.14
HERC2-207ENST00000564734 KHSRPQ92945 711 aaKnown RBP eCLIP15.9■□□□□ 0.145e-7■■■□□ 18.6
HERC2-207ENST00000564734 RAB3IPQ96QF0 476 aaPredicted RBP15.9■□□□□ 0.14
HERC2-207ENST00000564734 KLF6Q99612 283 aaPredicted RBP15.9■□□□□ 0.14
HERC2-207ENST00000564734 PCNTO95613 3336 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 LOC102724159A0A0B4J2E5 919 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 KBTBD13C9JR72 458 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 GOLGA8RI6L899 631 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 TRAFD1O14545 582 aaPredicted RBP15.89■□□□□ 0.13
HERC2-207ENST00000564734 FAM155BO75949 473 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 ANP32DO95626 131 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 TARSP26639 723 aaKnown RBP15.89■□□□□ 0.13
HERC2-207ENST00000564734 IGBP1P78318 339 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 PWP2Q15269 919 aaKnown RBP15.89■□□□□ 0.13
HERC2-207ENST00000564734 KYAT1Q16773 422 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 OR6B2Q6IFH4 312 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 PTPRN2Q92932 1015 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 MYCBPQ99417 103 aaPredicted RBP15.89■□□□□ 0.13
HERC2-207ENST00000564734 GEMIN8Q9NWZ8 242 aaKnown RBP15.89■□□□□ 0.13
HERC2-207ENST00000564734 HAO1Q9UJM8 370 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 C2CD2Q9Y426 696 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 PIK3R2O00459 728 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 ATP2A2P16615 1042 aaKnown RBP15.89■□□□□ 0.13
HERC2-207ENST00000564734 RBP5P82980 135 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 PDK2Q15119 407 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 KBTBD12Q3ZCT8 623 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 C1orf228Q6PIY5 440 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 MAMDC4Q6UXC1 1216 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 MANSC1Q9H8J5 431 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 DPP3Q9NY33 737 aa15.89■□□□□ 0.13
HERC2-207ENST00000564734 SPDYE5A6NIY4 337 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms