RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 DPCDQ9BVM2 203 aaPredicted RBP3.72□□□□□ -1.81
CHD9-211ENST00000564600 STK31Q9BXU1 1019 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 TRIM5Q9C035 493 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 TRMT13Q9NUP7 481 aaKnown RBP3.72□□□□□ -1.81
CHD9-211ENST00000564600 PCDHGB6Q9Y5F9 930 aa3.72□□□□□ -1.81
CHD9-211ENST00000564600 CNTNAP2Q9UHC6 1331 aa3.71□□□□□ -1.81
CHD9-211ENST00000564600 SMIM35A0A1B0GVV1 85 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 PPP6CO00743 305 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 FRS3O43559 492 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 PMPCBO75439 489 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 RASSF9O75901 435 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 RASAL1O95294 804 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 NTN1O95631 604 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 CYP2A6P11509 494 aaPredicted RBP3.71□□□□□ -1.82
CHD9-211ENST00000564600 GKP32189 559 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 ARHGAP25P42331 645 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 CCNIQ14094 377 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 KCNAB1Q14722 419 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 KIAA0753Q2KHM9 967 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 KIAA1614Q5VZ46 1190 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 TECPR1Q7Z6L1 1165 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 SPARTQ8N0X7 666 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 METTL25Q8N6Q8 603 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 TTC8Q8TAM2 541 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 LRTOMTQ8WZ04 291 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 TIFAQ96CG3 184 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 DAZAP1Q96EP5 407 aaKnown RBP3.71□□□□□ -1.82
CHD9-211ENST00000564600 ZC3H10Q96K80 434 aaKnown RBP3.71□□□□□ -1.82
CHD9-211ENST00000564600 ASB2Q96Q27 587 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 SNX18Q96RF0 628 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 PPP1R9BQ96SB3 815 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 APOL5Q9BWW9 433 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 SPRTNQ9H040 489 aaPredicted RBP3.71□□□□□ -1.82
CHD9-211ENST00000564600 CHST8Q9H2A9 424 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 KLHL42Q9P2K6 505 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 KLHL13Q9P2N7 655 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 AFF4Q9UHB7 1163 aaKnown RBP3.71□□□□□ -1.82
CHD9-211ENST00000564600 MID2Q9UJV3 735 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 BTBD3Q9Y2F9 522 aa3.71□□□□□ -1.82
CHD9-211ENST00000564600 ZNF804BA4D1E1 1349 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 LOC102723971A0A1B0GUV8 181 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 MBD3L4A6NDZ8 208 aaPredicted RBP3.7□□□□□ -1.82
CHD9-211ENST00000564600 MBD3L3A6NE82 208 aaPredicted RBP3.7□□□□□ -1.82
CHD9-211ENST00000564600 ISM1B1AKI9 464 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 H7C1Q1 480 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 RAB27BO00194 218 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 CD3EAPO15446 510 aaKnown RBP3.7□□□□□ -1.82
CHD9-211ENST00000564600 KCNAB3O43448 404 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 MAP4K4O95819 1239 aaPredicted RBP3.7□□□□□ -1.82
CHD9-211ENST00000564600 ZBED1O96006 694 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 KLRC1P26715 233 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 PEX2P28328 305 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 NTSR1P30989 418 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 DIO1P49895 249 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 TIAL1Q01085 375 aaKnown RBP eCLIP3.7□□□□□ -1.82
CHD9-211ENST00000564600 SATB1Q01826 763 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 LMAN2Q12907 356 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 ZNF750Q32MQ0 723 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 TBC1D25Q3MII6 688 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 CRELD2Q6UXH1 353 aaPredicted RBP3.7□□□□□ -1.82
CHD9-211ENST00000564600 UNC13DQ70J99 1090 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 RSPRY1Q96DX4 576 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 APIPQ96GX9 242 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 SUCLG2Q96I99 432 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 WACQ9BTA9 647 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 FAM204AQ9H8W3 233 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 OBP2AQ9NY56 170 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 HDAC9Q9UKV0 1011 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 AMFRQ9UKV5 643 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 ASAP1Q9ULH1 1129 aa3.7□□□□□ -1.82
CHD9-211ENST00000564600 FRMPD2Q68DX3 1309 aaPredicted RBP3.7□□□□□ -1.82
CHD9-211ENST00000564600 POC1B-GALNT4F8VUJ3 575 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 CES2O00748 559 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 RGS10O43665 173 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 TOP3BO95985 862 aaKnown RBP3.69□□□□□ -1.82
CHD9-211ENST00000564600 HRGP04196 525 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 TUBB4AP04350 444 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 PRKCBP05771 671 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 DLDP09622 509 aaKnown RBP3.69□□□□□ -1.82
CHD9-211ENST00000564600 U2AF1L5P0DN76 240 aaPredicted RBP3.69□□□□□ -1.82
CHD9-211ENST00000564600 APEHP13798 732 aaKnown RBP3.69□□□□□ -1.82
CHD9-211ENST00000564600 ATF7P17544 494 aaPredicted RBP3.69□□□□□ -1.82
CHD9-211ENST00000564600 MCM5P33992 734 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 COPB1P53618 953 aaKnown RBP3.69□□□□□ -1.82
CHD9-211ENST00000564600 TIRAPP58753 221 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 HTRA4P83105 476 aaPredicted RBP3.69□□□□□ -1.82
CHD9-211ENST00000564600 U2AF1Q01081 240 aaKnown RBP eCLIP3.69□□□□□ -1.82
CHD9-211ENST00000564600 DEUP1Q05D60 604 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 STK3Q13188 491 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 SEMA5AQ13591 1074 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 FHL3Q13643 280 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 ARHGEF7Q14155 803 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 GBX1Q14549 363 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 DAZAP2Q15038 168 aaPredicted RBP3.69□□□□□ -1.82
CHD9-211ENST00000564600 POLD3Q15054 466 aaPredicted RBP3.69□□□□□ -1.82
CHD9-211ENST00000564600 SEC23BQ15437 767 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 GALNT4Q8N4A0 578 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 SIRT6Q8N6T7 355 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 C11orf44Q8N8P7 122 aa3.69□□□□□ -1.82
CHD9-211ENST00000564600 VN1R3Q9BXE9 311 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms