RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 ARMCX3Q9UH62 379 aaPredicted RBP5.03□□□□□ -1.6
CAPN3-212ENST00000564503 PCYOX1Q9UHG3 505 aa5.03□□□□□ -1.6
CAPN3-212ENST00000564503 PCDHB10Q9UN67 800 aa5.03□□□□□ -1.6
CAPN3-212ENST00000564503 AGAP1Q9UPQ3 857 aa5.03□□□□□ -1.6
CAPN3-212ENST00000564503 NIP7Q9Y221 180 aaKnown RBP eCLIP5.03□□□□□ -1.6
CAPN3-212ENST00000564503 TRAF3IP3Q9Y228 551 aa5.03□□□□□ -1.6
CAPN3-212ENST00000564503 ZNF652Q9Y2D9 606 aa5.03□□□□□ -1.6
CAPN3-212ENST00000564503 ARL2BPQ9Y2Y0 163 aa5.03□□□□□ -1.6
CAPN3-212ENST00000564503 SNX24Q9Y343 169 aa5.03□□□□□ -1.6
CAPN3-212ENST00000564503 PCDHA2Q9Y5H9 948 aa5.03□□□□□ -1.6
CAPN3-212ENST00000564503 LTBP1Q14766 1721 aa5.03□□□□□ -1.6
CAPN3-212ENST00000564503 PLIN4Q96Q06 1357 aa5.03□□□□□ -1.6
CAPN3-212ENST00000564503 RPTORQ8N122 1335 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 PASKQ96RG2 1323 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 A0A1W2PQH9 124 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 E9PMD0 336 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 DDX3XO00571 662 aaKnown RBP eCLIP5.02□□□□□ -1.61
CAPN3-212ENST00000564503 PDXKO00764 312 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 PRRG2O14669 202 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 RIPK2O43353 540 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 SKAP2O75563 359 aaPredicted RBP5.02□□□□□ -1.61
CAPN3-212ENST00000564503 CAMTA2O94983 1202 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 SNUPNO95149 360 aaKnown RBP5.02□□□□□ -1.61
CAPN3-212ENST00000564503 TDP2O95551 362 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 BAG3O95817 575 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 TTLL1O95922 423 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 LDHCP07864 332 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 PLA2G4BP0C869 781 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 GOLGA8HP0CJ92 632 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 NEFHP12036 1026 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 ACTN1P12814 892 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 KRT13P13646 458 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 CCNB1P14635 433 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 CYP11B2P19099 503 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 TNFAIP3P21580 790 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 CTNNA2P26232 953 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 RPL13P26373 211 aaKnown RBP5.02□□□□□ -1.61
CAPN3-212ENST00000564503 HSD3B2P26439 372 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 HIBADHP31937 336 aaKnown RBP5.02□□□□□ -1.61
CAPN3-212ENST00000564503 SOX5P35711 763 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 MAPKAPK2P49137 400 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 PLTPP55058 493 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 KCNJ2P63252 427 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 IFI35P80217 286 aaPredicted RBP5.02□□□□□ -1.61
CAPN3-212ENST00000564503 PPARDQ03181 441 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 PRPF4BQ13523 1007 aaKnown RBP5.02□□□□□ -1.61
CAPN3-212ENST00000564503 SLC29A2Q14542 456 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 TAF11Q15544 211 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 NFIL3Q16649 462 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 KNOP1Q1ED39 458 aaKnown RBP5.02□□□□□ -1.61
CAPN3-212ENST00000564503 BMT2Q1RMZ1 405 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 PARP6Q2NL67 630 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 ASPRV1Q53RT3 343 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 HERC4Q5GLZ8 1057 aaPredicted RBP5.02□□□□□ -1.61
CAPN3-212ENST00000564503 SEL1L2Q5TEA6 688 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 C11orf63Q6NUN7 778 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 TSHZ1Q6ZSZ6 1077 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 TRMT10CQ7L0Y3 403 aaKnown RBP5.02□□□□□ -1.61
CAPN3-212ENST00000564503 ASRGL1Q7L266 308 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 EPM2AIP1Q7L775 607 aaPredicted RBP5.02□□□□□ -1.61
CAPN3-212ENST00000564503 SPATA21Q7Z572 469 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 GPBP1Q86WP2 473 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 FAM129CQ86XR2 697 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 NT5DC4Q86YG4 428 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 RHOT2Q8IXI1 618 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 LMNTD2Q8IXW0 634 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 KIRREL3Q8IZU9 778 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 UBL4BQ8N7F7 174 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 SLC30A5Q8TAD4 765 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 LNX1Q8TBB1 728 aaPredicted RBP5.02□□□□□ -1.61
CAPN3-212ENST00000564503 SLC35G2Q8TBE7 412 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 TBC1D16Q8TBP0 767 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 FBXO25Q8TCJ0 367 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 SH3TC2Q8TF17 1288 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 SCFD1Q8WVM8 642 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 CKAP2Q8WWK9 683 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 DYNLL2Q96FJ2 89 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 MAGEB18Q96M61 343 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 SERPINB12Q96P63 405 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 PIGSQ96S52 555 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 EYA3Q99504 573 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 TINF2Q9BSI4 451 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 MAF1Q9H063 256 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 KLHL25Q9H0H3 589 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 CCDC113Q9H0I3 377 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 KIF9Q9HAQ2 790 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 ERVK-5Q9HDB9 667 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 PDLIM7Q9NR12 457 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 TXLNGQ9NUQ3 528 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 TYW1Q9NV66 732 aaKnown RBP5.02□□□□□ -1.61
CAPN3-212ENST00000564503 GRHL1Q9NZI5 618 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 TBC1D7Q9P0N9 293 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 GCNT4Q9P109 453 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 WHRNQ9P202 907 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 PRKAG3Q9UGI9 489 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 DDX25Q9UHL0 483 aaKnown RBP5.02□□□□□ -1.61
CAPN3-212ENST00000564503 PCDHA12Q9UN75 941 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 STX8Q9UNK0 236 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 L3MBTL1Q9Y468 752 aa5.02□□□□□ -1.61
CAPN3-212ENST00000564503 MGAMO43451 1857 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms