RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 PAEPP09466 180 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 VDRP11473 427 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 TUBP50607 506 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 SLC7A9P82251 487 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 GCNT1Q02742 428 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 MTF1Q14872 753 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 ITPRIPL2Q3MIP1 535 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 DPCR1Q3MIW9 517 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 SGO2Q562F6 1265 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 HECTD3Q5T447 861 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 RALGPS2Q86X27 583 aaPredicted RBP14.15□□□□□ -0.14
CLK3-216ENST00000564468 DTWD2Q8NBA8 298 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 SCAMP5Q8TAC9 235 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 LMO3Q8TAP4 145 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 GPT2Q8TD30 523 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 FAM3CQ92520 227 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 EXOC4Q96A65 974 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 JAKMIP2Q96AA8 810 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 LRRC3BQ96PB8 259 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 FOXQ1Q9C009 403 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 SEMA4AQ9H3S1 761 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 HESX1Q9UBX0 185 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 CHORDC1Q9UHD1 332 aaPredicted RBP14.15□□□□□ -0.14
CLK3-216ENST00000564468 CCL26Q9Y258 94 aa14.15□□□□□ -0.14
CLK3-216ENST00000564468 MYOFQ9NZM1 2061 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 GTPBP10A4D1E9 387 aaKnown RBP14.14□□□□□ -0.15
CLK3-216ENST00000564468 OLFM2O95897 454 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 OAS1P00973 400 aaKnown RBP14.14□□□□□ -0.15
CLK3-216ENST00000564468 DCNP07585 359 aaKnown RBP14.14□□□□□ -0.15
CLK3-216ENST00000564468 CD19P15391 556 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 ACO1P21399 889 aaKnown RBP14.14□□□□□ -0.15
CLK3-216ENST00000564468 IFNAR2P48551 515 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 PSEN1P49768 467 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 USP4Q13107 963 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 RUNX3Q13761 415 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 STILQ15468 1287 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 ZNF77Q15935 545 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 TMEM270Q6UE05 265 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 SASS6Q6UVJ0 657 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 GBP6Q6ZN66 633 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 ENOSF1Q7L5Y1 443 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 ANKRD52Q8NB46 1076 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 SH3RF2Q8TEC5 729 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 ZFYVE19Q96K21 471 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 SLC22A12Q96S37 553 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 FAM83CQ9BQN1 747 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 SCML2Q9UQR0 700 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 PCDHB4Q9Y5E5 795 aa14.14□□□□□ -0.15
CLK3-216ENST00000564468 EP300Q09472 2414 aaPredicted RBP14.14□□□□□ -0.15
CLK3-216ENST00000564468 ATG2BQ96BY7 2078 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 SLC9A3R1O14745 358 aaPredicted RBP14.13□□□□□ -0.15
CLK3-216ENST00000564468 ZDHHC11BP0C7U3 371 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 MBL2P11226 248 aaPredicted RBP14.13□□□□□ -0.15
CLK3-216ENST00000564468 CD72P21854 359 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 TARSP26639 723 aaKnown RBP14.13□□□□□ -0.15
CLK3-216ENST00000564468 RPS9P46781 194 aaKnown RBP14.13□□□□□ -0.15
CLK3-216ENST00000564468 BCAT1P54687 386 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 NR1H3Q13133 447 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 MAN2A1Q16706 1144 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 SMYD5Q6GMV2 418 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 RBM43Q6ZSC3 357 aaKnown RBP14.13□□□□□ -0.15
CLK3-216ENST00000564468 TADA2BQ86TJ2 420 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 CPA6Q8N4T0 437 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 UBR7Q8N806 425 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 TTC16Q8NEE8 873 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 OSCP1Q8WVF1 389 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 ATP2A3Q93084 1043 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 CLDN23Q96B33 292 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 MED15Q96RN5 788 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 IER2Q9BTL4 223 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 NACA2Q9H009 215 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 RNF38Q9H0F5 515 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 INTS2Q9H0H0 1204 aaKnown RBP14.13□□□□□ -0.15
CLK3-216ENST00000564468 ANO10Q9NW15 660 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 DUS2Q9NX74 493 aaKnown RBP14.13□□□□□ -0.15
CLK3-216ENST00000564468 GTSE1Q9NYZ3 720 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 GMIPQ9P107 970 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 CPQQ9Y646 472 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 ZNF292O60281 2723 aa14.13□□□□□ -0.15
CLK3-216ENST00000564468 HHLA1C9JL84 531 aa14.12□□□□□ -0.15
CLK3-216ENST00000564468 SPECC1L-ADORA2AF8WAN1 911 aa14.12□□□□□ -0.15
CLK3-216ENST00000564468 LEFTY2O00292 366 aa14.12□□□□□ -0.15
CLK3-216ENST00000564468 NFATC1O95644 943 aa14.12□□□□□ -0.15
CLK3-216ENST00000564468 CTHP32929 405 aa14.12□□□□□ -0.15
CLK3-216ENST00000564468 KIF11P52732 1056 aa14.12□□□□□ -0.15
CLK3-216ENST00000564468 MFAP3P55082 362 aa14.12□□□□□ -0.15
CLK3-216ENST00000564468 BST2Q10589 180 aaKnown RBP14.12□□□□□ -0.15
CLK3-216ENST00000564468 LRRC32Q14392 662 aa14.12□□□□□ -0.15
CLK3-216ENST00000564468 EXOC3L4Q17RC7 722 aa14.12□□□□□ -0.15
CLK3-216ENST00000564468 CCDC183Q5T5S1 534 aa14.12□□□□□ -0.15
CLK3-216ENST00000564468 IRF2BP1Q8IU81 584 aa14.12□□□□□ -0.15
CLK3-216ENST00000564468 ARHGAP18Q8N392 663 aa14.12□□□□□ -0.15
CLK3-216ENST00000564468 CDK5RAP1Q96SZ6 601 aaKnown RBP14.12□□□□□ -0.15
CLK3-216ENST00000564468 DLGAP2Q9P1A6 1054 aa14.12□□□□□ -0.15
CLK3-216ENST00000564468 TSPAN16Q9UKR8 245 aa14.12□□□□□ -0.15
CLK3-216ENST00000564468 NDRG2Q9UN36 371 aaKnown RBP14.12□□□□□ -0.15
CLK3-216ENST00000564468 XPO1O14980 1071 aaKnown RBP14.11□□□□□ -0.15
CLK3-216ENST00000564468 COCHO43405 550 aa14.11□□□□□ -0.15
CLK3-216ENST00000564468 TLR5O60602 858 aa14.11□□□□□ -0.15
CLK3-216ENST00000564468 SETSIPP0DME0 302 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms