RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 TRIM21P19474 475 aaKnown RBP21.14■□□□□ 0.97
SHCBP1-203ENST00000564272 GJA4P35212 333 aa21.14■□□□□ 0.97
SHCBP1-203ENST00000564272 ZNF394Q53GI3 561 aa21.14■□□□□ 0.97
SHCBP1-203ENST00000564272 TMEM196Q5HYL7 178 aa21.14■□□□□ 0.97
SHCBP1-203ENST00000564272 MAMSTRQ6ZN01 415 aa21.14■□□□□ 0.97
SHCBP1-203ENST00000564272 CLEC20AQ6ZU45 233 aa21.14■□□□□ 0.97
SHCBP1-203ENST00000564272 TATDN2Q93075 761 aa21.14■□□□□ 0.97
SHCBP1-203ENST00000564272 SLC35C1Q96A29 364 aa21.14■□□□□ 0.97
SHCBP1-203ENST00000564272 CYFIP2Q96F07 1278 aa21.14■□□□□ 0.97
SHCBP1-203ENST00000564272 ARMCX3Q9UH62 379 aaPredicted RBP21.14■□□□□ 0.97
SHCBP1-203ENST00000564272 TRDMT1O14717 391 aaKnown RBP21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 COCHO43405 550 aa21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 CXCL12P48061 93 aa21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 PGFP49763 221 aa21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 GRSF1Q12849 480 aaKnown RBP eCLIP21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 MORC3Q14149 939 aa21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 PKN3Q6P5Z2 889 aa21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 ZBTB44Q8NCP5 570 aa21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 NELFBQ8WX92 580 aa21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 ATRIPQ8WXE1 791 aa21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 DUSP9Q99956 384 aaKnown RBP21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 CCSER2Q9H7U1 834 aa21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 CISHQ9NSE2 258 aa21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 COMMD8Q9NX08 183 aa21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 CFAP97Q9P2B7 532 aa21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 CTNND2Q9UQB3 1225 aa21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 PTPRZ1P23471 2315 aaPredicted RBP21.13■□□□□ 0.97
SHCBP1-203ENST00000564272 FAM92AA1XBS5 289 aa21.12■□□□□ 0.97
SHCBP1-203ENST00000564272 PPP1R3GB7ZBB8 358 aa21.12■□□□□ 0.97
SHCBP1-203ENST00000564272 HHLA1C9JL84 531 aa21.12■□□□□ 0.97
SHCBP1-203ENST00000564272 EGFP01133 1207 aa21.12■□□□□ 0.97
SHCBP1-203ENST00000564272 ZDHHC11BP0C7U3 371 aa21.12■□□□□ 0.97
SHCBP1-203ENST00000564272 PPP2R5DQ14738 602 aa21.12■□□□□ 0.97
SHCBP1-203ENST00000564272 HECTD3Q5T447 861 aa21.12■□□□□ 0.97
SHCBP1-203ENST00000564272 TTI2Q6NXR4 508 aa21.12■□□□□ 0.97
SHCBP1-203ENST00000564272 FILIP1Q7Z7B0 1213 aa21.12■□□□□ 0.97
SHCBP1-203ENST00000564272 CEP63Q96MT8 703 aa21.12■□□□□ 0.97
SHCBP1-203ENST00000564272 P2RY13Q9BPV8 354 aa21.12■□□□□ 0.97
SHCBP1-203ENST00000564272 FBRSL1Q9HCM7 1045 aaKnown RBP21.12■□□□□ 0.97
SHCBP1-203ENST00000564272 CYP26A1O43174 497 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 LILRB5O75023 590 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 NFATC1O95644 943 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 HOXC13P31276 330 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 PPP1R2P41236 205 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 GALK1P51570 392 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 AMPD2Q01433 879 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 DMWDQ09019 674 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 CCDC40Q4G0X9 1142 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 PPP1R26Q5T8A7 1209 aaPredicted RBP21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 SNX30Q5VWJ9 437 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 SYNPOQ8N3V7 929 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 SUMF1Q8NBK3 374 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 FAXDC2Q96IV6 333 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 ZFRQ96KR1 1074 aaKnown RBP21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 HEXIM2Q96MH2 286 aaKnown RBP21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 FAM126AQ9BYI3 521 aaPredicted RBP21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 FBXO44Q9H4M3 255 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 CHMP5Q9NZZ3 219 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 COQ4Q9Y3A0 265 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 GVINP1Q7Z2Y8 2422 aa21.11■□□□□ 0.97
SHCBP1-203ENST00000564272 GPR179Q6PRD1 2367 aa21.1■□□□□ 0.97
SHCBP1-203ENST00000564272 CYP17A1P05093 508 aa21.1■□□□□ 0.97
SHCBP1-203ENST00000564272 TUBP50607 506 aa21.1■□□□□ 0.97
SHCBP1-203ENST00000564272 RAD23BP54727 409 aa21.1■□□□□ 0.97
SHCBP1-203ENST00000564272 DDX42Q86XP3 938 aaKnown RBP eCLIP21.1■□□□□ 0.97
SHCBP1-203ENST00000564272 SLC4A11Q8NBS3 891 aa21.1■□□□□ 0.97
SHCBP1-203ENST00000564272 CD101Q93033 1021 aa21.1■□□□□ 0.97
SHCBP1-203ENST00000564272 METTL14Q9HCE5 456 aaKnown RBP21.1■□□□□ 0.97
SHCBP1-203ENST00000564272 K7ESF4 209 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 RNF40O75150 1001 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 PAPSS2O95340 614 aaPredicted RBP21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 ACO1P21399 889 aaKnown RBP21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 FMO5P49326 533 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 STX17P56962 302 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 UBE2HP62256 183 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 LRMPQ12912 555 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 NR1H3Q13133 447 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 CUL2Q13617 745 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 GAB4Q2WGN9 574 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 TTC39CQ8N584 583 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 EZH1Q92800 747 aaPredicted RBP21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 TMEM176AQ96HP8 235 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 DNAI2Q9GZS0 605 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 PNPLA8Q9NP80 782 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 TLR8Q9NR97 1041 aaKnown RBP21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 SCML2Q9UQR0 700 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 EP300Q09472 2414 aaPredicted RBP21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 ATG2BQ96BY7 2078 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 OTOGLQ3ZCN5 2332 aa21.09■□□□□ 0.97
SHCBP1-203ENST00000564272 BICDL2A1A5D9 508 aa21.08■□□□□ 0.97
SHCBP1-203ENST00000564272 CHURC1-FNTBB4DL54 471 aa21.08■□□□□ 0.97
SHCBP1-203ENST00000564272 TLR5O60602 858 aa21.08■□□□□ 0.97
SHCBP1-203ENST00000564272 DRD1P21728 446 aa21.08■□□□□ 0.97
SHCBP1-203ENST00000564272 FNTBP49356 437 aa21.08■□□□□ 0.97
SHCBP1-203ENST00000564272 NRLP54845 237 aa21.08■□□□□ 0.97
SHCBP1-203ENST00000564272 HEATR6Q6AI08 1181 aaKnown RBP21.08■□□□□ 0.97
SHCBP1-203ENST00000564272 WBP2Q969T9 261 aa21.08■□□□□ 0.97
SHCBP1-203ENST00000564272 HINFPQ9BQA5 517 aa21.08■□□□□ 0.97
SHCBP1-203ENST00000564272 DUSP16Q9BY84 665 aa21.08■□□□□ 0.97
SHCBP1-203ENST00000564272 NACA2Q9H009 215 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms