RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 KLK7P49862 253 aa17.58■□□□□ 0.4
RNF40-206ENST00000564260 TDGQ13569 410 aa17.58■□□□□ 0.4
RNF40-206ENST00000564260 TRIM72Q6ZMU5 477 aa17.58■□□□□ 0.4
RNF40-206ENST00000564260 DDX42Q86XP3 938 aaKnown RBP eCLIP17.58■□□□□ 0.4
RNF40-206ENST00000564260 SIX6OS1Q8N1H7 587 aa17.58■□□□□ 0.4
RNF40-206ENST00000564260 SCAMP5Q8TAC9 235 aa17.58■□□□□ 0.4
RNF40-206ENST00000564260 ING5Q8WYH8 240 aa17.58■□□□□ 0.4
RNF40-206ENST00000564260 MCRS1Q96EZ8 462 aa17.58■□□□□ 0.4
RNF40-206ENST00000564260 LIMD1Q9UGP4 676 aa17.58■□□□□ 0.4
RNF40-206ENST00000564260 NOTCH4Q99466 2003 aa17.58■□□□□ 0.4
RNF40-206ENST00000564260 TTC28Q96AY4 2481 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 EPHB6O15197 1021 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 ZBED1O96006 694 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 OAS1P00973 400 aaKnown RBP17.57■□□□□ 0.4
RNF40-206ENST00000564260 FERP16591 822 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 CDH5P33151 784 aaPredicted RBP17.57■□□□□ 0.4
RNF40-206ENST00000564260 CDR1P51861 262 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 SLC7A9P82251 487 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 TRIM14Q14142 442 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 FAM78AQ5JUQ0 283 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 HECTD3Q5T447 861 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 PPP1R2P3Q6NXS1 205 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 BEND5Q7L4P6 421 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 TMEM110Q86TL2 294 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 SLC47A2Q86VL8 602 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 CELF5Q8N6W0 485 aaKnown RBP17.57■□□□□ 0.4
RNF40-206ENST00000564260 TMEM35BQ8NCS4 154 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 MSANTD4Q8NCY6 345 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 ZNF397Q8NF99 534 aaPredicted RBP17.57■□□□□ 0.4
RNF40-206ENST00000564260 EPS8L1Q8TE68 723 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 SYN2Q92777 582 aaPredicted RBP17.57■□□□□ 0.4
RNF40-206ENST00000564260 SECISBP2LQ93073 1101 aaKnown RBP17.57■□□□□ 0.4
RNF40-206ENST00000564260 SLC46A2Q9BY10 475 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 TTYH3Q9C0H2 523 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 IFNKQ9P0W0 207 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 ARHGAP26Q9UNA1 814 aa17.57■□□□□ 0.4
RNF40-206ENST00000564260 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.57■□□□□ 0.41e-8■■■■■ 27.8
RNF40-206ENST00000564260 PATJQ8NI35 1801 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 TNFRSF10AO00220 468 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 FCARP24071 287 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 TKTL1P51854 596 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 CYP4F8P98187 520 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 PLCB2Q00722 1185 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 PFKPQ01813 784 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 CDR2Q01850 454 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 ZDHHC17Q8IUH5 632 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 ARID3BQ8IVW6 561 aaPredicted RBP17.56■□□□□ 0.4
RNF40-206ENST00000564260 MFSD6LQ8IWD5 586 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 SLC4A5Q9BY07 1137 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 NLRC4Q9NPP4 1024 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 TRPV5Q9NQA5 729 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 TDP1Q9NUW8 608 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 TMEM51Q9NW97 253 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 DUSP12Q9UNI6 340 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 NUMBLQ9Y6R0 609 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 NCOR1O75376 2440 aa17.56■□□□□ 0.4
RNF40-206ENST00000564260 BDP1A6H8Y1 2624 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 MUC3AQ02505 3323 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 DPYSL4O14531 572 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 DCXO43602 365 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 CKMP06732 381 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 RALAP11233 206 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 SRFP11831 508 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 GJA1P17302 382 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 PSMC3P17980 439 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 HDCP19113 662 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 SP100P23497 879 aaPredicted RBP17.55■□□□□ 0.4
RNF40-206ENST00000564260 FCHO2Q0JRZ9 810 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 PDCLQ13371 301 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 TXNDC8Q6A555 127 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 PMF1Q6P1K2 205 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 PARM1Q6UWI2 310 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 GPRIN1Q7Z2K8 1008 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 MAB21L3Q8N8X9 362 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 RNF214Q8ND24 703 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 UBA3Q8TBC4 463 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 DDX1Q92499 740 aaKnown RBP17.55■□□□□ 0.4
RNF40-206ENST00000564260 BAP1Q92560 729 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 FGF14Q92915 247 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 ZSWIM3Q96MP5 696 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 COL25A1Q9BXS0 654 aaPredicted RBP17.55■□□□□ 0.4
RNF40-206ENST00000564260 XPO4Q9C0E2 1151 aaKnown RBP17.55■□□□□ 0.4
RNF40-206ENST00000564260 PDCL3Q9H2J4 239 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 CD320Q9NPF0 282 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 SLC2A4RGQ9NR83 387 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 OLA1Q9NTK5 396 aaKnown RBP17.55■□□□□ 0.4
RNF40-206ENST00000564260 AIPL1Q9NZN9 384 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 GMIPQ9P107 970 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 GREB1Q4ZG55 1949 aa17.55■□□□□ 0.4
RNF40-206ENST00000564260 DOCK8Q8NF50 2099 aa17.54■□□□□ 0.4
RNF40-206ENST00000564260 GFPT2O94808 682 aa17.54■□□□□ 0.4
RNF40-206ENST00000564260 GLI1P08151 1106 aa17.54■□□□□ 0.4
RNF40-206ENST00000564260 MLLT6P55198 1093 aaPredicted RBP17.54■□□□□ 0.4
RNF40-206ENST00000564260 GOLGA8FQ08AF8 430 aa17.54■□□□□ 0.4
RNF40-206ENST00000564260 GOLGA8DPQ0D2H9 430 aa17.54■□□□□ 0.4
RNF40-206ENST00000564260 ADIGQ0VDE8 80 aa17.54■□□□□ 0.4
RNF40-206ENST00000564260 SPECC1LQ69YQ0 1117 aa17.54■□□□□ 0.4
RNF40-206ENST00000564260 SLC44A3Q8N4M1 653 aa17.54■□□□□ 0.4
RNF40-206ENST00000564260 C1orf131Q8NDD1 294 aaKnown RBP17.54■□□□□ 0.4
RNF40-206ENST00000564260 IPO4Q8TEX9 1081 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms