RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 MAN1A1P33908 653 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 CDR1P51861 262 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 ETF1P62495 437 aaKnown RBP13.46□□□□□ -0.25
CLK3-214ENST00000564096 MRPS5P82675 430 aaKnown RBP13.46□□□□□ -0.25
CLK3-214ENST00000564096 TAF12Q16514 161 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 ZNF569Q5MCW4 686 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 ARCQ7LC44 396 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 ITIH5Q86UX2 942 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 TCEAL8Q8IYN2 117 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 MRPL43Q8N983 215 aaKnown RBP13.46□□□□□ -0.25
CLK3-214ENST00000564096 TPCN2Q8NHX9 752 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 KLHL5Q96PQ7 755 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 ULBP1Q9BZM6 244 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 TJP2Q9UDY2 1190 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 STAP1Q9ULZ2 295 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 COG5Q9UP83 839 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 DUSP10Q9Y6W6 482 aa13.46□□□□□ -0.25
CLK3-214ENST00000564096 TCRBV5S1A1TA0A578 114 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 GRID2IPA4D2P6 1211 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 SPOPO43791 374 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 PALMO75781 387 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 CSH1P0DML2 217 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 CSH2P0DML3 217 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 TNNT1P13805 278 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 GPD1P21695 349 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 PSMA2P25787 234 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 SDC4P31431 198 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 SLC1A1P43005 524 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 DAOAP59103 153 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 ERVFC1P60507 584 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 IFRD2Q12894 506 aaPredicted RBP13.45□□□□□ -0.26
CLK3-214ENST00000564096 PIGHQ14442 188 aaPredicted RBP13.45□□□□□ -0.26
CLK3-214ENST00000564096 DNTTIP2Q5QJE6 756 aaKnown RBP13.45□□□□□ -0.26
CLK3-214ENST00000564096 PPP1R15BQ5SWA1 713 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 RTL10Q7L3V2 364 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 GPRIN1Q7Z2K8 1008 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 PHLDB2Q86SQ0 1253 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 SCUBE3Q8IX30 993 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 ELMOD1Q8N336 334 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 TTC9BQ8N6N2 239 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 SLITRK1Q96PX8 696 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 NCAPGQ9BPX3 1015 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 POPDC2Q9HBU9 364 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 TMEM30AQ9NV96 361 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 FBXW11Q9UKB1 542 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 SLC27A5Q9Y2P5 690 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 INSL5Q9Y5Q6 135 aa13.45□□□□□ -0.26
CLK3-214ENST00000564096 PATJQ8NI35 1801 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 TMEM265A0A087WTH1 108 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 CTAGE9A4FU28 777 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 TMEM191CA6NGB0 347 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 TMEM110-MUSTN1A8MSY1 372 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 DPYSL4O14531 572 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 CAPN9O14815 690 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 TGM5O43548 720 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 BUB1BO60566 1050 aaPredicted RBP13.44□□□□□ -0.26
CLK3-214ENST00000564096 PROSCO94903 275 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 VNN2O95498 520 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 LRG1P02750 347 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 LTFP02788 710 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 CASQ1P31415 396 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 GPR15P49685 360 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 EPHB3P54753 998 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 YWHAZP63104 245 aaKnown RBP13.44□□□□□ -0.26
CLK3-214ENST00000564096 MESDQ14696 234 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 DDR2Q16832 855 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 LLGL2Q6P1M3 1020 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 PEX26Q7Z412 305 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 SPRED2Q7Z698 418 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 SLC35F6Q8N357 371 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 PDZD8Q8NEN9 1154 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 SLC7A14Q8TBB6 771 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 GDPD5Q8WTR4 605 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 FBXO32Q969P5 355 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 NAPGQ99747 312 aaPredicted RBP13.44□□□□□ -0.26
CLK3-214ENST00000564096 PRO3102Q9H379 93 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 CERS4Q9HA82 394 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 RRN3Q9NYV6 651 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 UXTQ9UBK9 157 aaPredicted RBP13.44□□□□□ -0.26
CLK3-214ENST00000564096 CHORDC1Q9UHD1 332 aaPredicted RBP13.44□□□□□ -0.26
CLK3-214ENST00000564096 DNAI1Q9UI46 699 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 SALL4Q9UJQ4 1053 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 SCML2Q9UQR0 700 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 JRKLQ9Y4A0 524 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 USP3Q9Y6I4 520 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 PLXNA4Q9HCM2 1894 aa13.44□□□□□ -0.26
CLK3-214ENST00000564096 PTPRDP23468 1912 aa13.43□□□□□ -0.26
CLK3-214ENST00000564096 SPDYE4A6NLX3 237 aa13.43□□□□□ -0.26
CLK3-214ENST00000564096 SLC38A8A6NNN8 435 aa13.43□□□□□ -0.26
CLK3-214ENST00000564096 HIDE1A8MVS5 230 aa13.43□□□□□ -0.26
CLK3-214ENST00000564096 MIF4GDA9UHW6 222 aaKnown RBP13.43□□□□□ -0.26
CLK3-214ENST00000564096 TNFRSF10BO14763 440 aa13.43□□□□□ -0.26
CLK3-214ENST00000564096 ABL1P00519 1130 aa13.43□□□□□ -0.26
CLK3-214ENST00000564096 C8AP07357 584 aa13.43□□□□□ -0.26
CLK3-214ENST00000564096 USP17L7P0C7H9 530 aa13.43□□□□□ -0.26
CLK3-214ENST00000564096 PDGFRAP16234 1089 aa13.43□□□□□ -0.26
CLK3-214ENST00000564096 ATF6P18850 670 aa13.43□□□□□ -0.26
CLK3-214ENST00000564096 DNAJB1P25685 340 aa13.43□□□□□ -0.26
CLK3-214ENST00000564096 YWHAQP27348 245 aa13.43□□□□□ -0.26
CLK3-214ENST00000564096 PSEN1P49768 467 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms