RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 ZBTB45Q96K62 511 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 PPP1R9BQ96SB3 815 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 EFHD1Q9BUP0 239 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 TUBA8Q9NY65 449 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 TFCP2L1Q9NZI6 479 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 L1RE1Q9UN81 338 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 PAXBP1Q9Y5B6 917 aa4.08□□□□□ -1.76
HMGB1P33-201ENST00000563485 LOC102723971A0A1B0GUV8 181 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 TMEM232C9JQI7 657 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 FCHO1O14526 889 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 CD3EAPO15446 510 aaKnown RBP4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 SPRY2O43597 315 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 RGS10O43665 173 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 RRP9O43818 475 aaKnown RBP4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 MARCH6O60337 910 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 GCATO75600 419 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 ATP5F1P24539 256 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 KLRC1P26715 233 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 IL1R2P27930 398 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 EPHA3P29320 983 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 MTHFSP49914 203 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 COPB1P53618 953 aaKnown RBP4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 ZNF268Q14587 947 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 INSCQ1MX18 579 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 C3orf38Q5JPI3 329 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 FAM102BQ5T8I3 360 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 ZNF813Q6ZN06 617 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 PTCHD4Q6ZW05 846 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 CHPFQ8IZ52 775 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 ADAMTS18Q8TE60 1221 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 CTHRC1Q96CG8 243 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 FYTTD1Q96QD9 318 aaKnown RBP4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 FAM118BQ9BPY3 351 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 VN1R3Q9BXE9 311 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 STK31Q9BXU1 1019 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 TRIM5Q9C035 493 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 USP22Q9UPT9 525 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 CACNA1IQ9P0X4 2223 aa4.07□□□□□ -1.76
HMGB1P33-201ENST00000563485 M0R3H8 397 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 CCP110O43303 1012 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 RASSF9O75901 435 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 MT-CO3P00414 261 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 APEHP13798 732 aaKnown RBP4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 HGFP14210 728 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 PTDSS1P48651 473 aaKnown RBP4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 DIO1P49895 249 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 TIRAPP58753 221 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 TIAL1Q01085 375 aaKnown RBP eCLIP4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 TRIP6Q15654 476 aaKnown RBP4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 CNGA2Q16280 664 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 PLEKHG6Q3KR16 790 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 MINDY4Q4G0A6 757 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 RAB11FIP4Q86YS3 637 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 PRSS3P2Q8NHM4 247 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 PNISRQ8TF01 805 aaKnown RBP4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 NMD3Q96D46 503 aaKnown RBP4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 WDYHV1Q96HA8 205 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 CCDC17Q96LX7 622 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 C1orf112Q9NSG2 853 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 TRNAU1APQ9NX07 287 aaKnown RBP4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 AFF4Q9UHB7 1163 aaKnown RBP4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 DDX20Q9UHI6 824 aaKnown RBP4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 HDAC9Q9UKV0 1011 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 TPCN1Q9ULQ1 816 aa4.06□□□□□ -1.76
HMGB1P33-201ENST00000563485 ISM1B1AKI9 464 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 BTBD19C9JJ37 291 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 PROB1E7EW31 1015 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 AGPSO00116 658 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 ADAM10O14672 748 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 DSCR3O14972 297 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 FRS3O43559 492 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 PIAS2O75928 621 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 U2AF1L5P0DN76 240 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 IL1R1P14778 569 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 CREB1P16220 341 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 ZKSCAN1P17029 563 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 NR4A2P43354 598 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 RPS16P62249 146 aaKnown RBP4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 U2AF1Q01081 240 aaKnown RBP eCLIP4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 MAPK7Q13164 816 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 ARHGEF7Q14155 803 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 PPP2R5AQ15172 486 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 NPY5RQ15761 445 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 NFE2Q16621 373 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 ZNF750Q32MQ0 723 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 ARHGAP29Q52LW3 1261 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 PXDC1Q5TGL8 231 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 MEX3CQ5U5Q3 659 aaKnown RBP4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 BHLHA9Q7RTU4 235 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 TECPR1Q7Z6L1 1165 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 LINC01465Q8N7H1 131 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 MAGEB6Q8N7X4 407 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 MAFAQ8NHW3 353 aaPredicted RBP4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 ZNF398Q8TD17 642 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 SNX15Q9NRS6 342 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 COL20A1Q9P218 1284 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 MID2Q9UJV3 735 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 AFG3L2Q9Y4W6 797 aa4.05□□□□□ -1.76
HMGB1P33-201ENST00000563485 RAB27BO00194 218 aa4.04□□□□□ -1.76
HMGB1P33-201ENST00000563485 EXOC5O00471 708 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms