RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 NCKAP1LP55160 1127 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 USP46P62068 366 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 TMEM132DQ14C87 1099 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 KYAT1Q16773 422 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 HLA-BQ31612 363 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 INTS6LQ5JSJ4 861 aaKnown RBP8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 LY6G5CQ5SRR4 150 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 SYCP2LQ5T4T6 812 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 EGFLAMQ63HQ2 1017 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 SCARA3Q6AZY7 606 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 DHRS13Q6UX07 377 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 OSTM1Q86WC4 334 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 TMPRSS12Q86WS5 348 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 CD302Q8IX05 232 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 PDCL2Q8N4E4 241 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 ZCCHC9Q8N567 271 aaKnown RBP8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 FSIP1Q8NA03 581 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 TERB1Q8NA31 727 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 FOXJ1Q92949 421 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 NXPE2Q96DL1 559 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 MRGPRX1Q96LB2 322 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 KIF2CQ99661 725 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 GABRG3Q99928 467 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 ACBD6Q9BR61 282 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 TM6SF1Q9BZW5 370 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 BRMS1Q9HCU9 246 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 WSB2Q9NYS7 404 aaPredicted RBP8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 GMIPQ9P107 970 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 GTF3C4Q9UKN8 822 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 L1RE1Q9UN81 338 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 CPQQ9Y646 472 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 CYP46A1Q9Y6A2 500 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 SLCO1B1Q9Y6L6 691 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 FLNCQ14315 2725 aa8.28□□□□□ -1.08
HERPUD1-206ENST00000563343 DOPEY2Q9Y3R5 2298 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 ZNF840PA6NDX5 716 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 CAPN8A6NHC0 703 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 ERVH48-1M5A8F1 160 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 SLC9A3R1O14745 358 aaPredicted RBP8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 TRIM66O15016 1216 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 HOXC11O43248 304 aaPredicted RBP8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 HCRTO43612 131 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 ADH1CP00326 375 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 OAS1P00973 400 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 ACAT1P24752 427 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 MATR3P43243 847 aaKnown RBP eCLIP8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 MAGEA11P43364 429 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 PDE6CP51160 858 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 CLDN6P56747 220 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 TSPY1Q01534 308 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 TLE3Q04726 772 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 ORC2Q13416 577 aaPredicted RBP8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 RTP5Q14D33 572 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 ZNF174Q15697 407 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 WDR45BQ5MNZ6 344 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 LRRC69Q6ZNQ3 347 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 TRMT11Q7Z4G4 463 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 METTL3Q86U44 580 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 FMNL3Q8IVF7 1028 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 IGSF22Q8N9C0 903 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 FAM181AQ8N9Y4 354 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 WASF1Q92558 559 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 ERLEC1Q96DZ1 483 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 WBP1Q96G27 269 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 FUBP3Q96I24 572 aaKnown RBP eCLIP8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 ZFRQ96KR1 1074 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 SPATA17Q96L03 361 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 MMTAG2Q9BU76 263 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 TIPINQ9BVW5 301 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 TTLL2Q9BWV7 592 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 ASB7Q9H672 318 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 DDX43Q9NXZ2 648 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 DPP3Q9NY33 737 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 USP36Q9P275 1121 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 DACH1Q9UI36 760 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 C2CD2Q9Y426 696 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 RAD54BQ9Y620 910 aa8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 ARID1BQ8NFD5 2236 aaPredicted RBP8.27□□□□□ -1.09
HERPUD1-206ENST00000563343 COL27A1Q8IZC6 1860 aaPredicted RBP8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 A0A1B0GVT2 93 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 TBC1D3BA6NDS4 549 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 PP2D1A8MPX8 630 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 KCNJ18B7U540 433 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 B8ZZF3 427 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 PRRT4C9JH25 899 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 BCAT2O15382 392 aaPredicted RBP8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 PAPSS1O43252 624 aaPredicted RBP8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 NDUFS2O75306 463 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 WISP1O95388 367 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 NCAM1P13591 858 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 CD6P30203 668 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 WNT7BP56706 349 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 KCNC4Q03721 635 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 GAD2Q05329 585 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 SV2CQ496J9 727 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 C10orf76Q5T2E6 689 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 DCAF12L1Q5VU92 463 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 FAM171BQ6P995 826 aa8.26□□□□□ -1.09
HERPUD1-206ENST00000563343 IL27RAQ6UWB1 636 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms