RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 DUPD1Q68J44 220 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 CWF19L1Q69YN2 538 aaKnown RBP8.47□□□□□ -1.05
KARS-203ENST00000562875 KRT39Q6A163 491 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 RNF207Q6ZRF8 634 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 TRMT10CQ7L0Y3 403 aaKnown RBP8.47□□□□□ -1.05
KARS-203ENST00000562875 OTUD6AQ7L8S5 288 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 SPRED2Q7Z698 418 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 SPICE1Q8N0Z3 855 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 ARHGEF39Q8N4T4 335 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 BVESQ8NE79 360 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 FLCNQ8NFG4 579 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 RDM1Q8NG50 284 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 ZNF564Q8TBZ8 553 aaPredicted RBP8.47□□□□□ -1.05
KARS-203ENST00000562875 CCDC77Q9BR77 488 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 LGR4Q9BXB1 951 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 GOLPH3Q9H4A6 298 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 HSPBP1Q9NZL4 362 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 AJAP1Q9UKB5 411 aaPredicted RBP8.47□□□□□ -1.05
KARS-203ENST00000562875 ZBTB21Q9ULJ3 1066 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 ALG6Q9Y672 507 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 NFS1Q9Y697 457 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 SMCHD1A6NHR9 2005 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 COL11A1P12107 1806 aaPredicted RBP8.47□□□□□ -1.05
KARS-203ENST00000562875 PHIPQ8WWQ0 1821 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 C5orf60A6NFR6 353 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 ANKRD65E5RJM6 399 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 DDX39AO00148 427 aaKnown RBP8.46□□□□□ -1.06
KARS-203ENST00000562875 AGRPO00253 132 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 KIAA0391O15091 583 aaKnown RBP8.46□□□□□ -1.06
KARS-203ENST00000562875 ASAP2O43150 1006 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 PPIP5K2O43314 1243 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 CTNND1O60716 968 aaKnown RBP8.46□□□□□ -1.06
KARS-203ENST00000562875 LYPLA2O95372 231 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 ICAM1P05362 532 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 ASNSP08243 561 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 MMP10P09238 476 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 VCAM1P19320 739 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 HNRNPH1P31943 449 aaKnown RBP8.46□□□□□ -1.06
KARS-203ENST00000562875 SLC8A1P32418 973 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 SLC1A1P43005 524 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 HSD17B4P51659 736 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 PLTPP55058 493 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 PSMC5P62195 406 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 GTF2BQ00403 316 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 MTMR1Q13613 665 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 LRP8Q14114 963 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 COG2Q14746 738 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 LIN9Q5TKA1 542 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 SPATC1Q76KD6 591 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 HAUS6Q7Z4H7 955 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 RPAINQ86UA6 219 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 LDHDQ86WU2 507 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 ZNF677Q86XU0 584 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 SIAH1Q8IUQ4 282 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 PPM1KQ8N3J5 372 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 OR2W6PQ8NHA6 318 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 CCHCR1Q8TD31 782 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 RAPGEF5Q92565 580 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 TLCD1Q96CP7 247 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 TMEM109Q9BVC6 243 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 NUP85Q9BW27 656 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 CELF4Q9BZC1 486 aaKnown RBP8.46□□□□□ -1.06
KARS-203ENST00000562875 YY1AP1Q9H869 796 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 C17orf75Q9HAS0 396 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 TMEM8AQ9HCN3 771 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 C1orf112Q9NSG2 853 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 ANKEF1Q9NU02 776 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 INTS9Q9NV88 658 aaKnown RBP8.46□□□□□ -1.06
KARS-203ENST00000562875 PFDN2Q9UHV9 154 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 SLC12A6Q9UHW9 1150 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 GTF3C4Q9UKN8 822 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 PCDHA11Q9Y5I1 949 aa8.46□□□□□ -1.06
KARS-203ENST00000562875 SCO2A0A1W2PP80 73 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 TLDC2A0PJX2 215 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 TCP10L2B9ZVM9 353 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 FOXN3O00409 490 aaPredicted RBP8.45□□□□□ -1.06
KARS-203ENST00000562875 RASGRF2O14827 1237 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 CHUKO15111 745 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 WDR46O15213 610 aaKnown RBP8.45□□□□□ -1.06
KARS-203ENST00000562875 CYP1A2P05177 515 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 ITGAVP06756 1048 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 SYPP08247 313 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 GSTA1P08263 222 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 MMEP08473 750 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 ARP10275 920 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 RARGP13631 454 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 COMTP21964 271 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 MAPK4P31152 587 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 YWHABP31946 246 aaKnown RBP8.45□□□□□ -1.06
KARS-203ENST00000562875 COILP38432 576 aaPredicted RBP8.45□□□□□ -1.06
KARS-203ENST00000562875 SEC24CP53992 1094 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 NCKAP1LP55160 1127 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 PCBP3P57721 371 aaKnown RBP8.45□□□□□ -1.06
KARS-203ENST00000562875 UBXN2AP68543 259 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 CDR2Q01850 454 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 POU5F1Q01860 360 aaKnown RBP8.45□□□□□ -1.06
KARS-203ENST00000562875 EGR3Q06889 387 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 SNCBQ16143 134 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 CYP1B1Q16678 543 aa8.45□□□□□ -1.06
KARS-203ENST00000562875 FAM102BQ5T8I3 360 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms