RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 LVRNQ6Q4G3 990 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 EPM2AIP1Q7L775 607 aaPredicted RBP3.87□□□□□ -1.79
DENND4A-205ENST00000562540 PIM3Q86V86 326 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 CAND1Q86VP6 1230 aaKnown RBP3.87□□□□□ -1.79
DENND4A-205ENST00000562540 FMNL3Q8IVF7 1028 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 MYO1HQ8N1T3 1032 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 PRR18Q8N4B5 295 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 RBMXL3Q8N7X1 1067 aaKnown RBP3.87□□□□□ -1.79
DENND4A-205ENST00000562540 MAGEB6Q8N7X4 407 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.87□□□□□ -1.79
DENND4A-205ENST00000562540 ZNF398Q8TD17 642 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 DIS3LQ8TF46 1054 aaKnown RBP3.87□□□□□ -1.79
DENND4A-205ENST00000562540 TSR2Q969E8 191 aaKnown RBP3.87□□□□□ -1.79
DENND4A-205ENST00000562540 C1GALT1C1Q96EU7 318 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 CCDC17Q96LX7 622 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 PPP1R10Q96QC0 940 aaKnown RBP3.87□□□□□ -1.79
DENND4A-205ENST00000562540 PRR25Q96S07 402 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 CXorf36Q9H7Y0 433 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 TRMT13Q9NUP7 481 aaKnown RBP3.87□□□□□ -1.79
DENND4A-205ENST00000562540 TMEM184CQ9NVA4 438 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 PNPOQ9NVS9 261 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 AMFRQ9UKV5 643 aa3.87□□□□□ -1.79
DENND4A-205ENST00000562540 GOLGA6CA6NDK9 693 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 GOLGA6BA6NDN3 693 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 B4DGG1 531 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 PRPF3O43395 683 aaKnown RBP3.86□□□□□ -1.79
DENND4A-205ENST00000562540 VNN1O95497 513 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 GOLGA6DP0CG33 693 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 ATF3P18847 181 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 HDCP19113 662 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 ME1P48163 572 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 MAP2K6P52564 334 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 SOX8P57073 446 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 MYO1EQ12965 1108 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 ATAT1Q5SQI0 421 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 EMC10Q5UCC4 262 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 ANKRD13BQ86YJ7 626 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 DENND1CQ8IV53 801 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 SFTPA1Q8IWL2 248 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 SIRT6Q8N6T7 355 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 ZNF548Q8NEK5 533 aaPredicted RBP3.86□□□□□ -1.79
DENND4A-205ENST00000562540 MAP4K1Q92918 833 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 MTFMTQ96DP5 389 aaKnown RBP3.86□□□□□ -1.79
DENND4A-205ENST00000562540 TAAR9Q96RI9 348 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 FAM234AQ9H0X4 552 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 GOLGA6AQ9NYA3 693 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 HEY2Q9UBP5 337 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 STXBP5LQ9Y2K9 1186 aa3.86□□□□□ -1.79
DENND4A-205ENST00000562540 ERVV-2B6SEH9 535 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 PRSS44E7EML9 344 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 H3BUI4 141 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 TLR2O60603 784 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 PARNO95453 639 aaKnown RBP3.85□□□□□ -1.79
DENND4A-205ENST00000562540 FGAP02671 866 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 T-ENOLP0DO92 83 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 PHKG2P15735 406 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 PSG6Q00889 435 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 KRT17Q04695 432 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 LY6KQ17RY6 165 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 C4orf46Q504U0 113 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 ANO7Q6IWH7 933 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 B3GNT9Q6UX72 402 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 DEF8Q6ZN54 512 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 COLCA1Q6ZS62 124 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 IZUMO1Q8IYV9 350 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 ABRAQ8N0Z2 381 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 KRT78Q8N1N4 520 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 ARFGAP1Q8N6T3 406 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 ZBTB8BQ8NAP8 495 aaPredicted RBP3.85□□□□□ -1.79
DENND4A-205ENST00000562540 ZBTB34Q8NCN2 500 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 SLC35G2Q8TBE7 412 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 PNISRQ8TF01 805 aaKnown RBP3.85□□□□□ -1.79
DENND4A-205ENST00000562540 CDK5RAP3Q96JB5 506 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 CTAGE1Q96RT6 745 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 CGRRF1Q99675 332 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 CHPF2Q9P2E5 772 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 XPR1Q9UBH6 696 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 SNX14Q9Y5W7 946 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 HS3ST3B1Q9Y662 390 aa3.85□□□□□ -1.79
DENND4A-205ENST00000562540 VSTM5A8MXK1 200 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 H3BML4 177 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 GTPBP1O00178 669 aaKnown RBP3.84□□□□□ -1.79
DENND4A-205ENST00000562540 CES2O00748 559 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 CTNND1O60716 968 aaKnown RBP3.84□□□□□ -1.79
DENND4A-205ENST00000562540 TULP3O75386 442 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 ALDH2P05091 517 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 CDKN2AP42771 156 aaKnown RBP3.84□□□□□ -1.79
DENND4A-205ENST00000562540 SUMO2P61956 95 aaKnown RBP3.84□□□□□ -1.79
DENND4A-205ENST00000562540 HYAL1Q12794 435 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 GFOD2Q3B7J2 385 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 ARHGAP29Q52LW3 1261 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 AWAT1Q58HT5 328 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 UBAP2Q5T6F2 1119 aaKnown RBP3.84□□□□□ -1.79
DENND4A-205ENST00000562540 DAB2IPQ5VWQ8 1189 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 TMEM65Q6PI78 240 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 DAAM2Q86T65 1068 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.84□□□□□ -1.79
DENND4A-205ENST00000562540 RUNDC1Q96C34 613 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 SLC35A4Q96G79 324 aa3.84□□□□□ -1.79
DENND4A-205ENST00000562540 CCDC136Q96JN2 1154 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms