RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ATXN3LQ9H3M9 355 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 KCNK12Q9HB15 430 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 HESX1Q9UBX0 185 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 CYTH4Q9UIA0 394 aa14.16□□□□□ -0.14
CDH1-204ENST00000562118 GBP2P32456 591 aaPredicted RBP14.15□□□□□ -0.14
CDH1-204ENST00000562118 SLC7A9P82251 487 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 CYP4F8P98187 520 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 ARID5BQ14865 1188 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 PTPN21Q16825 1174 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 ARHGAP15Q53QZ3 475 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 DENND1BQ6P3S1 775 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 KLHDC10Q6PID8 442 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 PARM1Q6UWI2 310 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 SCD5Q86SK9 330 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 TMEM110Q86TL2 294 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 NOP9Q86U38 636 aaKnown RBP14.15□□□□□ -0.14
CDH1-204ENST00000562118 CMTM8Q8IZV2 173 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 ZSCAN18Q8TBC5 510 aaPredicted RBP14.15□□□□□ -0.14
CDH1-204ENST00000562118 SECISBP2LQ93073 1101 aaKnown RBP14.15□□□□□ -0.14
CDH1-204ENST00000562118 FBXO32Q969P5 355 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 RSPRY1Q96DX4 576 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 IQCDQ96DY2 449 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 GCNAQ96QF7 691 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 CNGB3Q9NQW8 809 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 CLIC5Q9NZA1 410 aa14.15□□□□□ -0.14
CDH1-204ENST00000562118 MAGED2Q9UNF1 606 aaPredicted RBP14.15□□□□□ -0.14
CDH1-204ENST00000562118 M0QYV0 167 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 AP5Z1O43299 807 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 THAP12O43422 761 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 PRAMEF12O95522 483 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 STAT1P42224 750 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 PDE6CP51160 858 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 SLC8A3P57103 927 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 FCHO2Q0JRZ9 810 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 USP4Q13107 963 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 TAF12Q16514 161 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 GPR158Q5T848 1215 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 TXNDC8Q6A555 127 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 UBA3Q8TBC4 463 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 MRPS31Q92665 395 aaKnown RBP14.14□□□□□ -0.15
CDH1-204ENST00000562118 KHSRPQ92945 711 aaKnown RBP eCLIP14.14□□□□□ -0.15
CDH1-204ENST00000562118 E2F7Q96AV8 911 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 MCRS1Q96EZ8 462 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 ZFRQ96KR1 1074 aaKnown RBP14.14□□□□□ -0.15
CDH1-204ENST00000562118 SLC22A12Q96S37 553 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 XPO4Q9C0E2 1151 aaKnown RBP14.14□□□□□ -0.15
CDH1-204ENST00000562118 RBSNQ9H1K0 784 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 KIF9Q9HAQ2 790 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 NLRC4Q9NPP4 1024 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 OSER1Q9NX31 292 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 AIPL1Q9NZN9 384 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 TRPM5Q9NZQ8 1165 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 IFNKQ9P0W0 207 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 GMIPQ9P107 970 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 LIMD1Q9UGP4 676 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 ARHGAP26Q9UNA1 814 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 DUSP12Q9UNI6 340 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 NUMBLQ9Y6R0 609 aa14.14□□□□□ -0.15
CDH1-204ENST00000562118 C2orf78A6NCI8 922 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 ARNTLO00327 626 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 LSM8O95777 96 aaKnown RBP14.13□□□□□ -0.15
CDH1-204ENST00000562118 CHRNB2P17787 502 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 SP100P23497 879 aaPredicted RBP14.13□□□□□ -0.15
CDH1-204ENST00000562118 PRKCIP41743 596 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 PSEN1P49768 467 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 TKTL1P51854 596 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 ZXDBP98169 803 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 PDCLQ13371 301 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 E4F1Q66K89 784 aaPredicted RBP14.13□□□□□ -0.15
CDH1-204ENST00000562118 TANGO2Q6ICL3 276 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 BEND5Q7L4P6 421 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 IRF2BP2Q7Z5L9 587 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 FMNL3Q8IVF7 1028 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 ARID3BQ8IVW6 561 aaPredicted RBP14.13□□□□□ -0.15
CDH1-204ENST00000562118 SLC44A3Q8N4M1 653 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 RNF214Q8ND24 703 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 RIN3Q8TB24 985 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 IRGQQ8WZA9 623 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 USP13Q92995 863 aaPredicted RBP14.13□□□□□ -0.15
CDH1-204ENST00000562118 LRRC3BQ96PB8 259 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 RPP25Q9BUL9 199 aaKnown RBP14.13□□□□□ -0.15
CDH1-204ENST00000562118 NUP58Q9BVL2 599 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 NMUR1Q9HB89 426 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 TRPV5Q9NQA5 729 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 SLC2A4RGQ9NR83 387 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 TLR8Q9NR97 1041 aaKnown RBP14.13□□□□□ -0.15
CDH1-204ENST00000562118 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.13□□□□□ -0.15
CDH1-204ENST00000562118 SORCS3Q9UPU3 1222 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 TICRRQ7Z2Z1 1910 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 TECTAO75443 2155 aa14.13□□□□□ -0.15
CDH1-204ENST00000562118 TRAV19A0A0A6YYK7 116 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 PI4K2BG5E9Z4 385 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 FBXO21O94952 628 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 ZBED1O96006 694 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 CYP1A1P04798 512 aaPredicted RBP14.12□□□□□ -0.15
CDH1-204ENST00000562118 GYPCP04921 128 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 ASGR2P07307 311 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 ACADSBP45954 432 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 GABRB2P47870 512 aa14.12□□□□□ -0.15
CDH1-204ENST00000562118 DAOAP59103 153 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms