RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 TATDN2Q93075 761 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 NIF3L1Q9GZT8 377 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 IMPAD1Q9NX62 359 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 MROH7Q68CQ1 1323 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 RHOBTB1O94844 696 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 PSMB9P28065 219 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 STIP1P31948 543 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 SOX6P35712 828 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 CEP68Q76N32 757 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 ZNF560Q96MR9 790 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 ROGDIQ9GZN7 287 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 KIAA1683Q9H0B3 1180 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 RPAP3Q9H6T3 665 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 DNALI1O14645 258 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 ZNF197O14709 1029 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 AKAP3O75969 853 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 SERPIND1P05546 499 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 FGFR3P22607 806 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 POU4F1Q01851 419 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 CHRNB3Q05901 458 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 AADACL2Q6P093 401 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 KYQ8NBH2 561 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 KIAA0895Q8NCT3 520 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 TNIP2Q8NFZ5 429 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 BTN2A2Q8WVV5 523 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 DCLK3Q9C098 648 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 COPS7BQ9H9Q2 264 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 MRGBPQ9NV56 204 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 KLF15Q9UIH9 416 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 PCDHB9Q9Y5E1 797 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 OVOS2A0A0G2JMS6 1433 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 CPA3P15088 417 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 SOAT1P35610 550 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 AGKQ53H12 422 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 C16orf86Q6ZW13 317 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 CENPLQ8N0S6 344 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 PHF21AQ96BD5 680 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 PLEKHA8Q96JA3 519 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 MED15Q96RN5 788 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 SEPHS2Q99611 448 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 ACAD9Q9H845 621 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 GPRC5CQ9NQ84 441 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 FAM205AQ6ZU69 1335 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 PRR23AA6NEV1 266 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 SSTR1P30872 391 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 PRKCEQ02156 737 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 TRAF2Q12933 501 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 SNAPC2Q13487 334 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 ANGPT1Q15389 498 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 DGKDQ16760 1214 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 IRAK1BP1Q5VVH5 260 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 STRA8Q7Z7C7 330 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 RNF180Q86T96 592 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 ZFRQ96KR1 1074 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 DDX50Q9BQ39 737 aaKnown RBP10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 CBWD1Q9BRT8 395 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 PLA2G12BQ9BX93 195 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 TJP2Q9UDY2 1190 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 FBXO40Q9UH90 709 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 TBX20Q9UMR3 447 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 DAGLAQ9Y4D2 1042 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 MSH4O15457 936 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 ASNA1O43681 348 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 PMPCBO75439 489 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 HIST1H2AGP0C0S8 130 aaPredicted RBP10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 HIST1H2ADP20671 130 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 PEX5P50542 639 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 DEFB115Q30KQ5 88 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 XKR3Q5GH77 459 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 CENPPQ6IPU0 288 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 CYP2R1Q6VVX0 501 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 HIST1H2AHQ96KK5 128 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 HIST1H2AJQ99878 128 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 H2AFJQ9BTM1 129 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 NT5C1AQ9BXI3 368 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 MADDQ8WXG6 1647 aa10.54□□□□□ -0.72
GTF3C1-202ENST00000561623 APOA4P06727 396 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 ETS2P15036 469 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 SP100P23497 879 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 RPA3P35244 121 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 CSE1LP55060 971 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 NCKAP1LP55160 1127 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 VEPH1Q14D04 833 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 EARS2Q5JPH6 523 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 OTUD3Q5T2D3 398 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 N4BP2L1Q5TBK1 243 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 CALML6Q8TD86 181 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 APOL2Q9BQE5 337 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 C6orf62Q9GZU0 229 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 FAM192AQ9GZU8 254 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 MAP3K20Q9NYL2 800 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 SOX13Q9UN79 622 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 SLC26A4O43511 780 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 ENTPD5O75356 428 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 RARAP10276 462 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 CPB1P15086 417 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 ADRA1DP25100 572 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 GIT2Q14161 759 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 TTLL4Q14679 1199 aa10.53□□□□□ -0.72
GTF3C1-202ENST00000561623 CCNG2Q16589 344 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms