RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 PDE4CQ08493 712 aa21.01■□□□□ 0.95
TSPAN3-210ENST00000561277 BST2Q10589 180 aaKnown RBP21.01■□□□□ 0.95
TSPAN3-210ENST00000561277 KRT31Q15323 416 aa21.01■□□□□ 0.95
TSPAN3-210ENST00000561277 ASTLQ6HA08 431 aaPredicted RBP21.01■□□□□ 0.95
TSPAN3-210ENST00000561277 PIGZQ86VD9 579 aa21.01■□□□□ 0.95
TSPAN3-210ENST00000561277 TTC8Q8TAM2 541 aa21.01■□□□□ 0.95
TSPAN3-210ENST00000561277 CSGALNACT1Q8TDX6 532 aa21.01■□□□□ 0.95
TSPAN3-210ENST00000561277 SHDQ96IW2 340 aa21.01■□□□□ 0.95
TSPAN3-210ENST00000561277 FOXQ1Q9C009 403 aa21.01■□□□□ 0.95
TSPAN3-210ENST00000561277 NAT10Q9H0A0 1025 aaKnown RBP21.01■□□□□ 0.95
TSPAN3-210ENST00000561277 CCSER2Q9H7U1 834 aa21.01■□□□□ 0.95
TSPAN3-210ENST00000561277 SIX2Q9NPC8 291 aa21.01■□□□□ 0.95
TSPAN3-210ENST00000561277 ARHGAP26Q9UNA1 814 aa21.01■□□□□ 0.95
TSPAN3-210ENST00000561277 SCML2Q9UQR0 700 aa21.01■□□□□ 0.95
TSPAN3-210ENST00000561277 COL4A2P08572 1712 aa21■□□□□ 0.95
TSPAN3-210ENST00000561277 TPM2P07951 284 aa21■□□□□ 0.95
TSPAN3-210ENST00000561277 PFKLP17858 780 aa21■□□□□ 0.95
TSPAN3-210ENST00000561277 USP8P40818 1118 aa21■□□□□ 0.95
TSPAN3-210ENST00000561277 KIF11P52732 1056 aa21■□□□□ 0.95
TSPAN3-210ENST00000561277 PRKCQQ04759 706 aa21■□□□□ 0.95
TSPAN3-210ENST00000561277 TNK2Q07912 1038 aa21■□□□□ 0.95
TSPAN3-210ENST00000561277 MTF1Q14872 753 aa21■□□□□ 0.95
TSPAN3-210ENST00000561277 HECTD3Q5T447 861 aa21■□□□□ 0.95
TSPAN3-210ENST00000561277 CC2D1AQ6P1N0 951 aaPredicted RBP21■□□□□ 0.95
TSPAN3-210ENST00000561277 FAM81BQ96LP2 452 aa21■□□□□ 0.95
TSPAN3-210ENST00000561277 ZSWIM1Q9BR11 485 aa21■□□□□ 0.95
TSPAN3-210ENST00000561277 TLR8Q9NR97 1041 aaKnown RBP21■□□□□ 0.95
TSPAN3-210ENST00000561277 GTSE1Q9NYZ3 720 aa21■□□□□ 0.95
TSPAN3-210ENST00000561277 AJAP1Q9UKB5 411 aaPredicted RBP21■□□□□ 0.95
TSPAN3-210ENST00000561277 HCN4Q9Y3Q4 1203 aa21■□□□□ 0.95
TSPAN3-210ENST00000561277 CPQQ9Y646 472 aa21■□□□□ 0.95
TSPAN3-210ENST00000561277 HELZP42694 1942 aaKnown RBP21■□□□□ 0.95
TSPAN3-210ENST00000561277 SYCE3A1L190 88 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 M0QYV0 167 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 XPO1O14980 1071 aaKnown RBP20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 COCHO43405 550 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 OLFM2O95897 454 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 ZDHHC11BP0C7U3 371 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 MBL2P11226 248 aaPredicted RBP20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 AVPR2P30518 371 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 ZXDBP98169 803 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 PLCB2Q00722 1185 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 USP4Q13107 963 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 NCAPHQ15003 741 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 ZNF77Q15935 545 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 TRIM68Q6AZZ1 485 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 LCLAT1Q6UWP7 414 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 TMEM105Q8N8V8 129 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 NACA2Q9H009 215 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 TRPV5Q9NQA5 729 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 GKN1Q9NS71 199 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 CNTN6Q9UQ52 1028 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 PIAS3Q9Y6X2 628 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 KMT2EQ8IZD2 1858 aa20.99■□□□□ 0.95
TSPAN3-210ENST00000561277 A0A1W2PQH9 124 aa20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 PI15O43692 258 aa20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 TLR5O60602 858 aa20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 AOC1P19801 751 aa20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 KPNA1P52294 538 aaPredicted RBP20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 STARD6P59095 220 aa20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 SLC7A9P82251 487 aa20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 UBXN2BQ14CS0 331 aa20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 SNX30Q5VWJ9 437 aa20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 ANKRD20A12PQ8NF67 263 aa20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 LSM14BQ9BX40 385 aaKnown RBP20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 NMUR1Q9HB89 426 aa20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 ACP6Q9NPH0 428 aa20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 DNAJC12Q9UKB3 198 aa20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 WNT6Q9Y6F9 365 aa20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 KIF26AQ9ULI4 1882 aaPredicted RBP20.98■□□□□ 0.95
TSPAN3-210ENST00000561277 BECN2A8MW95 431 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 LEFTY2O00292 366 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 LETM1O95202 739 aaPredicted RBP20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 SETSIPP0DME0 302 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 CDK11BP21127 795 aaKnown RBP20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 SOX9P48436 509 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 CLCN5P51795 746 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 TKTL1P51854 596 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 KCNMA1Q12791 1236 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 STILQ15468 1287 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 CNGA2Q16280 664 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 CCDC186Q7Z3E2 898 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 UBXN6Q9BZV1 441 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 EBF3Q9H4W6 596 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 LRRC4Q9HBW1 653 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 OSER1Q9NX31 292 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 NAGPAQ9UK23 515 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 USP3Q9Y6I4 520 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 ZNF318Q5VUA4 2279 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 KANSL1LA0AUZ9 987 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 SCAMP3O14828 347 aaKnown RBP20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 PNMA6AP0CW24 399 aaPredicted RBP20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 GNA15P30679 374 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 TUBP50607 506 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 RAPGEF1Q13905 1077 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 PKDCCQ504Y2 493 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 RAB41Q5JT25 222 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 ZNF852Q6ZMS4 543 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 PJA1Q8NG27 643 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms